Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cacfd1 | Fam163a | ENSMUSP00000109640 | ENSMUSP00000015628 | Calcium channel flower homolog; Belongs to the calcium channel flower family. | Protein FAM163A. | 0.538 |
Cacfd1 | Mindy1 | ENSMUSP00000109640 | ENSMUSP00000102805 | Calcium channel flower homolog; Belongs to the calcium channel flower family. | Ubiquitin carboxyl-terminal hydrolase MINDY-1; Hydrolase that can specifically remove 'Lys-48'-linked conjugated ubiquitin from proteins. Has exodeubiquitinase activity and has a preference for long polyubiquitin chains. May play a regulatory role at the level of protein turnover. | 0.430 |
Cacfd1 | Prrg1 | ENSMUSP00000109640 | ENSMUSP00000109659 | Calcium channel flower homolog; Belongs to the calcium channel flower family. | Proline-rich Gla (G-carboxyglutamic acid) 1. | 0.448 |
Cacfd1 | Smim14 | ENSMUSP00000109640 | ENSMUSP00000122363 | Calcium channel flower homolog; Belongs to the calcium channel flower family. | Small integral membrane protein 14. | 0.454 |
Fam163a | Cacfd1 | ENSMUSP00000015628 | ENSMUSP00000109640 | Protein FAM163A. | Calcium channel flower homolog; Belongs to the calcium channel flower family. | 0.538 |
Fam163a | Fras1 | ENSMUSP00000015628 | ENSMUSP00000043250 | Protein FAM163A. | Extracellular matrix protein FRAS1; Belongs to the FRAS1 family. | 0.580 |
Fam163a | Lrp10 | ENSMUSP00000015628 | ENSMUSP00000022782 | Protein FAM163A. | Low-density lipoprotein receptor-related protein 10; Probable receptor, which is involved in the internalization of lipophilic molecules and/or signal transduction. May be involved in the uptake of lipoprotein APOE in liver. | 0.511 |
Fam163a | Mamdc2 | ENSMUSP00000015628 | ENSMUSP00000045432 | Protein FAM163A. | MAM domain-containing protein 2. | 0.655 |
Fam163a | Mapre2 | ENSMUSP00000015628 | ENSMUSP00000025127 | Protein FAM163A. | Microtubule-associated protein RP/EB family member 2; May be involved in microtubule polymerization, and spindle function by stabilizing microtubules and anchoring them at centrosomes. May play a role in cell migration (By similarity). | 0.494 |
Fam163a | Mindy1 | ENSMUSP00000015628 | ENSMUSP00000102805 | Protein FAM163A. | Ubiquitin carboxyl-terminal hydrolase MINDY-1; Hydrolase that can specifically remove 'Lys-48'-linked conjugated ubiquitin from proteins. Has exodeubiquitinase activity and has a preference for long polyubiquitin chains. May play a regulatory role at the level of protein turnover. | 0.467 |
Fam163a | Prrg1 | ENSMUSP00000015628 | ENSMUSP00000109659 | Protein FAM163A. | Proline-rich Gla (G-carboxyglutamic acid) 1. | 0.460 |
Fam163a | Smim14 | ENSMUSP00000015628 | ENSMUSP00000122363 | Protein FAM163A. | Small integral membrane protein 14. | 0.465 |
Fam163a | Tafa1 | ENSMUSP00000015628 | ENSMUSP00000113152 | Protein FAM163A. | Chemokine-like protein TAFA-1; Regulatory factor which is ligand for GPR1 and is involved in the modulation of neural stem-cell proliferation and differentiation. | 0.507 |
Fam163a | Wdr38 | ENSMUSP00000015628 | ENSMUSP00000108493 | Protein FAM163A. | WD repeat-containing protein 38. | 0.495 |
Fras1 | Fam163a | ENSMUSP00000043250 | ENSMUSP00000015628 | Extracellular matrix protein FRAS1; Belongs to the FRAS1 family. | Protein FAM163A. | 0.580 |
Lrp10 | Fam163a | ENSMUSP00000022782 | ENSMUSP00000015628 | Low-density lipoprotein receptor-related protein 10; Probable receptor, which is involved in the internalization of lipophilic molecules and/or signal transduction. May be involved in the uptake of lipoprotein APOE in liver. | Protein FAM163A. | 0.511 |
Mamdc2 | Fam163a | ENSMUSP00000045432 | ENSMUSP00000015628 | MAM domain-containing protein 2. | Protein FAM163A. | 0.655 |
Mapre2 | Fam163a | ENSMUSP00000025127 | ENSMUSP00000015628 | Microtubule-associated protein RP/EB family member 2; May be involved in microtubule polymerization, and spindle function by stabilizing microtubules and anchoring them at centrosomes. May play a role in cell migration (By similarity). | Protein FAM163A. | 0.494 |
Mindy1 | Cacfd1 | ENSMUSP00000102805 | ENSMUSP00000109640 | Ubiquitin carboxyl-terminal hydrolase MINDY-1; Hydrolase that can specifically remove 'Lys-48'-linked conjugated ubiquitin from proteins. Has exodeubiquitinase activity and has a preference for long polyubiquitin chains. May play a regulatory role at the level of protein turnover. | Calcium channel flower homolog; Belongs to the calcium channel flower family. | 0.430 |
Mindy1 | Fam163a | ENSMUSP00000102805 | ENSMUSP00000015628 | Ubiquitin carboxyl-terminal hydrolase MINDY-1; Hydrolase that can specifically remove 'Lys-48'-linked conjugated ubiquitin from proteins. Has exodeubiquitinase activity and has a preference for long polyubiquitin chains. May play a regulatory role at the level of protein turnover. | Protein FAM163A. | 0.467 |
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