STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ssxb2Synovial sarcoma, X member B2. (165 aa)    
Predicted Functional Partners:
Mageb5
Melanoma antigen, family B, 5.
   
 
 0.572
Cby3
Protein chibby homolog 3.
      
 0.554
Acot10
Acyl-coenzyme A thioesterase 10, mitochondrial; Acyl-CoA thioesterases are a group of enzymes that catalyze the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Active on long chain acyl-CoAs.
      
 0.491
Speer4e
Spermatogenesis-associated glutamate (E)-rich protein 4e.
      
 0.491
Gm21725
Predicted gene, 21725.
      
 0.479
Gm21891
Predicted gene, 21891.
      
 0.479
Gm21764
Predicted gene, 21764.
      
 0.479
Gm21828
Predicted gene, 21828.
      
 0.479
Gm21904
Serine-rich secreted Y-linked protein.
      
 0.476
Srsy
Serine-rich, secreted, Y-linked.
      
 0.476
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.