STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prss29Serine protease 29; Involved in embryo hatching and implantation. Belongs to the peptidase S1 family. (279 aa)    
Predicted Functional Partners:
Spink1
Serine protease inhibitor Kazal-type 1; Serine protease inhibitor which exhibits anti-trypsin activity. In the pancreas, protects against trypsin-catalyzed premature activation of zymogens.
   
 
 0.543
Morn1
MORN repeat-containing 1.
      
 0.483
Trmt9b
Probable tRNA methyltransferase 9B; May modifie wobble uridines in specific arginine and glutamic acid tRNAs. Acts as a tumor suppressor by promoting the expression of LIN9 (By similarity); Belongs to the methyltransferase superfamily.
    
 
 0.480
Wfdc3
WAP four-disulfide core domain protein 3.
   
 
 0.454
Zgrf1
Protein ZGRF1.
      
 0.421
Lonrf1
LON peptidase N-terminal domain and RING finger protein 1.
    
 
 0.418
Purg
Purine-rich element-binding protein gamma.
      
 0.413
Prm3
Protamine-3; Protamines substitute for histones in the chromatin of sperm during the haploid phase of spermatogenesis. They compact sperm DNA into a highly condensed, stable and inactive complex.
   
  
 0.412
C130074G19Rik
Uncharacterized protein C1orf115 homolog.
      
 0.410
Gm21830
Predicted gene, 21830.
      
 0.410
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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