STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
1700013G24RikRIKEN cDNA 1700013G24 gene. (286 aa)    
Predicted Functional Partners:
4933417A18Rik
Uncharacterized protein C6orf201 homolog.
   
  
 0.865
4930505A04Rik
Uncharacterized protein C2orf73 homolog.
   
  
 0.844
Fam209
Family with sequence similarity 209.
   
  
 0.760
1700013F07Rik
Protein C1orf194 homolog; May play an important role for the maintenance of myelin-axon integrity. May affect intracellular Ca(2+) homeostasis (By similarity).
   
  
 0.756
Ccer1
Coiled-coil domain-containing glutamate-rich protein 1.
   
  
 0.756
1700001P01Rik
Uncharacterized protein C17orf98 homolog.
   
  
 0.756
Morn5
MORN repeat-containing protein 5.
   
  
 0.741
Fam71f1
Protein FAM71F1; Belongs to the FAM71 family.
   
  
 0.713
Fam71e1
Protein FAM71E1.
   
  
 0.707
Tmco5
Transmembrane and coiled-coil domain-containing protein 5A; Belongs to the TMCO5 family.
   
  
 0.683
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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