Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
1810046K07Rik | Tmc3 | ENSMUSP00000036912 | ENSMUSP00000046028 | Uncharacterized protein C11orf53 homolog. | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | 0.544 |
Gm765 | Tmc3 | ENSMUSP00000127120 | ENSMUSP00000046028 | Gene model 765, (NCBI). | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | 0.641 |
Lhfpl5 | Tmc3 | ENSMUSP00000156959 | ENSMUSP00000046028 | LHFPL tetraspan subfamily member 5 protein; In the inner ear, may be a component of the hair cell's mechanotransduction machinery that functionally couples PCDH15 to the transduction channel. Regulates transducer channel conductance and is required for fast channel adaptation; Belongs to the LHFP family. | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | 0.417 |
Lhfpl5 | Tmie | ENSMUSP00000156959 | ENSMUSP00000060148 | LHFPL tetraspan subfamily member 5 protein; In the inner ear, may be a component of the hair cell's mechanotransduction machinery that functionally couples PCDH15 to the transduction channel. Regulates transducer channel conductance and is required for fast channel adaptation; Belongs to the LHFP family. | Transmembrane inner ear expressed protein; Unknown. The protein may play some role in a cellular membrane location. May reside within an internal membrane compartment and function in pathways such as those involved in protein and/or vesicle trafficking. Alternatively, the mature protein may be localized in the plasma membrane and serve as a site of interaction for other molecules through its highly charged C-terminal domain. | 0.997 |
Prrg3 | Tmc3 | ENSMUSP00000038947 | ENSMUSP00000046028 | Transmembrane gamma-carboxyglutamic acid protein 3. | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | 0.410 |
Tlnrd1 | Tmc3 | ENSMUSP00000091769 | ENSMUSP00000046028 | Talin rod domain-containing protein 1; Actin-binding protein which may have an oncogenic function and regulates cell proliferation, migration and invasion in cancer cells. | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | 0.436 |
Tmc3 | 1810046K07Rik | ENSMUSP00000046028 | ENSMUSP00000036912 | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | Uncharacterized protein C11orf53 homolog. | 0.544 |
Tmc3 | Gm765 | ENSMUSP00000046028 | ENSMUSP00000127120 | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | Gene model 765, (NCBI). | 0.641 |
Tmc3 | Lhfpl5 | ENSMUSP00000046028 | ENSMUSP00000156959 | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | LHFPL tetraspan subfamily member 5 protein; In the inner ear, may be a component of the hair cell's mechanotransduction machinery that functionally couples PCDH15 to the transduction channel. Regulates transducer channel conductance and is required for fast channel adaptation; Belongs to the LHFP family. | 0.417 |
Tmc3 | Prrg3 | ENSMUSP00000046028 | ENSMUSP00000038947 | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | Transmembrane gamma-carboxyglutamic acid protein 3. | 0.410 |
Tmc3 | Tlnrd1 | ENSMUSP00000046028 | ENSMUSP00000091769 | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | Talin rod domain-containing protein 1; Actin-binding protein which may have an oncogenic function and regulates cell proliferation, migration and invasion in cancer cells. | 0.436 |
Tmc3 | Tmie | ENSMUSP00000046028 | ENSMUSP00000060148 | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | Transmembrane inner ear expressed protein; Unknown. The protein may play some role in a cellular membrane location. May reside within an internal membrane compartment and function in pathways such as those involved in protein and/or vesicle trafficking. Alternatively, the mature protein may be localized in the plasma membrane and serve as a site of interaction for other molecules through its highly charged C-terminal domain. | 0.500 |
Tmc3 | Uts2b | ENSMUSP00000046028 | ENSMUSP00000070840 | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | Urotensin-2B; Potent vasoconstrictor; Belongs to the urotensin-2 family. | 0.493 |
Tmie | Lhfpl5 | ENSMUSP00000060148 | ENSMUSP00000156959 | Transmembrane inner ear expressed protein; Unknown. The protein may play some role in a cellular membrane location. May reside within an internal membrane compartment and function in pathways such as those involved in protein and/or vesicle trafficking. Alternatively, the mature protein may be localized in the plasma membrane and serve as a site of interaction for other molecules through its highly charged C-terminal domain. | LHFPL tetraspan subfamily member 5 protein; In the inner ear, may be a component of the hair cell's mechanotransduction machinery that functionally couples PCDH15 to the transduction channel. Regulates transducer channel conductance and is required for fast channel adaptation; Belongs to the LHFP family. | 0.997 |
Tmie | Tmc3 | ENSMUSP00000060148 | ENSMUSP00000046028 | Transmembrane inner ear expressed protein; Unknown. The protein may play some role in a cellular membrane location. May reside within an internal membrane compartment and function in pathways such as those involved in protein and/or vesicle trafficking. Alternatively, the mature protein may be localized in the plasma membrane and serve as a site of interaction for other molecules through its highly charged C-terminal domain. | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | 0.500 |
Uts2b | Tmc3 | ENSMUSP00000070840 | ENSMUSP00000046028 | Urotensin-2B; Potent vasoconstrictor; Belongs to the urotensin-2 family. | Transmembrane channel-like protein 3; Probable ion channel; Belongs to the TMC family. | 0.493 |