Sprr2b protein (mouse) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Mus musculus

NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
2310050C09Rik	Lce1a2	ENSMUSP00000126921	ENSMUSP00000029530	RIKEN cDNA 2310050C09 gene.	Late cornified envelope 1A2.	0.852
2310050C09Rik	Lce1b	ENSMUSP00000126921	ENSMUSP00000029531	RIKEN cDNA 2310050C09 gene.	Late cornified envelope 1B.	0.880
2310050C09Rik	Lce1c	ENSMUSP00000126921	ENSMUSP00000045573	RIKEN cDNA 2310050C09 gene.	Late cornified envelope 1C.	0.880
2310050C09Rik	Lce1e	ENSMUSP00000126921	ENSMUSP00000088380	RIKEN cDNA 2310050C09 gene.	Late cornified envelope 1E.	0.759
2310050C09Rik	Sprr1b	ENSMUSP00000126921	ENSMUSP00000058617	RIKEN cDNA 2310050C09 gene.	Cornifin-B; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane; Belongs to the cornifin (SPRR) family.	0.523
2310050C09Rik	Sprr2b	ENSMUSP00000126921	ENSMUSP00000058131	RIKEN cDNA 2310050C09 gene.	Small proline-rich protein 2B; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity).	0.605
2310050C09Rik	Sprr2d	ENSMUSP00000126921	ENSMUSP00000039821	RIKEN cDNA 2310050C09 gene.	Small proline-rich protein 2D; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity).	0.511
Lce1a2	2310050C09Rik	ENSMUSP00000029530	ENSMUSP00000126921	Late cornified envelope 1A2.	RIKEN cDNA 2310050C09 gene.	0.852
Lce1a2	Lce1b	ENSMUSP00000029530	ENSMUSP00000029531	Late cornified envelope 1A2.	Late cornified envelope 1B.	0.958
Lce1a2	Lce1c	ENSMUSP00000029530	ENSMUSP00000045573	Late cornified envelope 1A2.	Late cornified envelope 1C.	0.895
Lce1a2	Lce1e	ENSMUSP00000029530	ENSMUSP00000088380	Late cornified envelope 1A2.	Late cornified envelope 1E.	0.879
Lce1a2	Sprr1b	ENSMUSP00000029530	ENSMUSP00000058617	Late cornified envelope 1A2.	Cornifin-B; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane; Belongs to the cornifin (SPRR) family.	0.555
Lce1a2	Sprr2b	ENSMUSP00000029530	ENSMUSP00000058131	Late cornified envelope 1A2.	Small proline-rich protein 2B; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity).	0.453
Lce1a2	Sprr2d	ENSMUSP00000029530	ENSMUSP00000039821	Late cornified envelope 1A2.	Small proline-rich protein 2D; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity).	0.410
Lce1b	2310050C09Rik	ENSMUSP00000029531	ENSMUSP00000126921	Late cornified envelope 1B.	RIKEN cDNA 2310050C09 gene.	0.880
Lce1b	Lce1a2	ENSMUSP00000029531	ENSMUSP00000029530	Late cornified envelope 1B.	Late cornified envelope 1A2.	0.958
Lce1b	Lce1c	ENSMUSP00000029531	ENSMUSP00000045573	Late cornified envelope 1B.	Late cornified envelope 1C.	0.961
Lce1b	Lce1e	ENSMUSP00000029531	ENSMUSP00000088380	Late cornified envelope 1B.	Late cornified envelope 1E.	0.930
Lce1b	Sprr1b	ENSMUSP00000029531	ENSMUSP00000058617	Late cornified envelope 1B.	Cornifin-B; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane; Belongs to the cornifin (SPRR) family.	0.630
Lce1b	Sprr2b	ENSMUSP00000029531	ENSMUSP00000058131	Late cornified envelope 1B.	Small proline-rich protein 2B; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity).	0.455