Oog3 protein (mouse) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Oog3

Oogenesin-3; Belongs to the PRAME family. (500 aa)

Predicted Functional Partners:

Oog2

0.948

Omt2a

0.927

Fau

0.911

Tcl1b3

0.909

Oog4

0.897

Tcl1b1

0.888

Omt2b

0.871

Nlrp4b

0.871

Obox2

0.828

Oosp3

0.823

Your Current Organism:

Mus musculus

NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fau	Oog2	ENSMUSP00000136358	ENSMUSP00000079267	Ubiquitin-like protein FUBI; Belongs to the ubiquitin family.	Oogenesin-2.	0.911
Fau	Oog3	ENSMUSP00000136358	ENSMUSP00000059834	Ubiquitin-like protein FUBI; Belongs to the ubiquitin family.	Oogenesin-3; Belongs to the PRAME family.	0.911
Fau	Oog4	ENSMUSP00000136358	ENSMUSP00000073325	Ubiquitin-like protein FUBI; Belongs to the ubiquitin family.	Oog4 protein.	0.911
Nlrp4b	Obox2	ENSMUSP00000113095	ENSMUSP00000042995	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	Oocyte-specific homeobox 2.	0.807
Nlrp4b	Omt2a	ENSMUSP00000113095	ENSMUSP00000126342	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	Oocyte maturation, alpha.	0.618
Nlrp4b	Oog2	ENSMUSP00000113095	ENSMUSP00000079267	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	Oogenesin-2.	0.845
Nlrp4b	Oog3	ENSMUSP00000113095	ENSMUSP00000059834	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	Oogenesin-3; Belongs to the PRAME family.	0.871
Nlrp4b	Oog4	ENSMUSP00000113095	ENSMUSP00000073325	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	Oog4 protein.	0.883
Nlrp4b	Oosp3	ENSMUSP00000113095	ENSMUSP00000064913	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	Oocyte-secreted protein 3; Belongs to the PLAC1 family.	0.728
Obox2	Nlrp4b	ENSMUSP00000042995	ENSMUSP00000113095	Oocyte-specific homeobox 2.	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	0.807
Obox2	Omt2a	ENSMUSP00000042995	ENSMUSP00000126342	Oocyte-specific homeobox 2.	Oocyte maturation, alpha.	0.463
Obox2	Omt2b	ENSMUSP00000042995	ENSMUSP00000036132	Oocyte-specific homeobox 2.	Oocyte maturation, beta.	0.465
Obox2	Oog2	ENSMUSP00000042995	ENSMUSP00000079267	Oocyte-specific homeobox 2.	Oogenesin-2.	0.696
Obox2	Oog3	ENSMUSP00000042995	ENSMUSP00000059834	Oocyte-specific homeobox 2.	Oogenesin-3; Belongs to the PRAME family.	0.828
Obox2	Oog4	ENSMUSP00000042995	ENSMUSP00000073325	Oocyte-specific homeobox 2.	Oog4 protein.	0.794
Obox2	Oosp3	ENSMUSP00000042995	ENSMUSP00000064913	Oocyte-specific homeobox 2.	Oocyte-secreted protein 3; Belongs to the PLAC1 family.	0.805
Obox2	Tcl1b1	ENSMUSP00000042995	ENSMUSP00000082118	Oocyte-specific homeobox 2.	Protein TCL1B1; Belongs to the TCL1 family.	0.463
Obox2	Tcl1b3	ENSMUSP00000042995	ENSMUSP00000088512	Oocyte-specific homeobox 2.	Protein TCL1B3; Belongs to the TCL1 family.	0.545
Omt2a	Nlrp4b	ENSMUSP00000126342	ENSMUSP00000113095	Oocyte maturation, alpha.	NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors.	0.618
Omt2a	Obox2	ENSMUSP00000126342	ENSMUSP00000042995	Oocyte maturation, alpha.	Oocyte-specific homeobox 2.	0.463