Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
1700008P02Rik | Fam241b | ENSMUSP00000088923 | ENSMUSP00000115865 | RIKEN cDNA 1700008P02 gene. | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | 0.641 |
Alpk1 | Fam241b | ENSMUSP00000029662 | ENSMUSP00000115865 | Alpha-protein kinase 1; Serine/threonine-protein kinase that detects bacterial pathogen-associated molecular pattern metabolites (PAMPs) and initiates an innate immune response, a critical step for pathogen elimination and engagement of adaptive immunity (By similarity). Specifically recognizes and binds ADP-D-glycero-beta-D-manno-heptose (ADP-Heptose), a potent PAMP present in all Gram-negative and some Gram-positive bacteria. ADP-Heptose-binding stimulates its kinase activity to phosphorylate and activate TIFA, triggering proinflammatory NF-kappa-B signaling (By similarity). May be i [...] | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | 0.433 |
Bcas3 | Fam241b | ENSMUSP00000074416 | ENSMUSP00000115865 | Breast carcinoma-amplified sequence 3 homolog; Functions synergistically with PELP1 as a transcriptional coactivator of estrogen receptor-responsive genes. Stimulates histone acetyltransferase activity. Binds to chromatin (By similarity). Plays a role in angiogenesis. Participates in the regulation of cell polarity and directional endothelial cell migration by mediating both the activation and recruitment of CDC42 and the reorganization of the actin cytoskeleton at the cell leading edge. Promotes filipodia formation. Belongs to the BCAS3 family. | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | 0.431 |
Fam241b | 1700008P02Rik | ENSMUSP00000115865 | ENSMUSP00000088923 | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | RIKEN cDNA 1700008P02 gene. | 0.641 |
Fam241b | Alpk1 | ENSMUSP00000115865 | ENSMUSP00000029662 | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | Alpha-protein kinase 1; Serine/threonine-protein kinase that detects bacterial pathogen-associated molecular pattern metabolites (PAMPs) and initiates an innate immune response, a critical step for pathogen elimination and engagement of adaptive immunity (By similarity). Specifically recognizes and binds ADP-D-glycero-beta-D-manno-heptose (ADP-Heptose), a potent PAMP present in all Gram-negative and some Gram-positive bacteria. ADP-Heptose-binding stimulates its kinase activity to phosphorylate and activate TIFA, triggering proinflammatory NF-kappa-B signaling (By similarity). May be i [...] | 0.433 |
Fam241b | Bcas3 | ENSMUSP00000115865 | ENSMUSP00000074416 | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | Breast carcinoma-amplified sequence 3 homolog; Functions synergistically with PELP1 as a transcriptional coactivator of estrogen receptor-responsive genes. Stimulates histone acetyltransferase activity. Binds to chromatin (By similarity). Plays a role in angiogenesis. Participates in the regulation of cell polarity and directional endothelial cell migration by mediating both the activation and recruitment of CDC42 and the reorganization of the actin cytoskeleton at the cell leading edge. Promotes filipodia formation. Belongs to the BCAS3 family. | 0.431 |
Fam241b | Ipo9 | ENSMUSP00000115865 | ENSMUSP00000036093 | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | Importin-9; Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran- dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis re [...] | 0.410 |
Fam241b | Mapre3 | ENSMUSP00000115865 | ENSMUSP00000031058 | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | Microtubule-associated protein RP/EB family member 3; Plus-end tracking protein (+TIP) that binds to the plus-end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes microtubule growth. May be involved in spindle function by stabilizing microtubules and anchoring them at centrosomes. Also acts as a regulator of minus-end microtubule organization: interacts with the complex formed by AKAP9 and PDE4DIP, leading to recruit CAMSAP2 to the Golgi apparatus, thereby tethering non- centrosomal minus-end microtubules to the Golgi, an important step for polarized [...] | 0.429 |
Fam241b | Vnn3 | ENSMUSP00000115865 | ENSMUSP00000020190 | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | Vascular non-inflammatory molecule 3; Amidohydrolase that hydrolyzes specifically one of the carboamide linkages in D-pantetheine thus recycling pantothenic acid (vitamin B5) and releasing cysteamine; Belongs to the carbon-nitrogen hydrolase superfamily. BTD/VNN family. | 0.468 |
Ipo9 | Fam241b | ENSMUSP00000036093 | ENSMUSP00000115865 | Importin-9; Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran- dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis re [...] | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | 0.410 |
Mapre3 | Fam241b | ENSMUSP00000031058 | ENSMUSP00000115865 | Microtubule-associated protein RP/EB family member 3; Plus-end tracking protein (+TIP) that binds to the plus-end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes microtubule growth. May be involved in spindle function by stabilizing microtubules and anchoring them at centrosomes. Also acts as a regulator of minus-end microtubule organization: interacts with the complex formed by AKAP9 and PDE4DIP, leading to recruit CAMSAP2 to the Golgi apparatus, thereby tethering non- centrosomal minus-end microtubules to the Golgi, an important step for polarized [...] | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | 0.429 |
Vnn3 | Fam241b | ENSMUSP00000020190 | ENSMUSP00000115865 | Vascular non-inflammatory molecule 3; Amidohydrolase that hydrolyzes specifically one of the carboamide linkages in D-pantetheine thus recycling pantothenic acid (vitamin B5) and releasing cysteamine; Belongs to the carbon-nitrogen hydrolase superfamily. BTD/VNN family. | Protein FAM241B; May play a role in lysosome homeostasis. Belongs to the FAM241 family. | 0.468 |