STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YdjcCarbohydrate deacetylase; Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides. (310 aa)    
Predicted Functional Partners:
Ccdc116
Coiled-coil domain-containing protein 116.
   
  
 0.641
Maskbp3
Multiple ankyrin repeats single KH domain-binding protein 3.
      
 0.579
4930452B06Rik
Uncharacterized protein C3orf67 homolog.
      
 0.552
Saxo2
Stabilizer of axonemal microtubules 2; Belongs to the FAM154 family.
      
 0.538
4930539E08Rik
Protein BNIP5.
   
  
 0.522
Cdc16
Cell division cycle protein 16 homolog; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains (By similarity).
    
 
 0.511
Mmgt2
Membrane magnesium transporter 2; Mediates Mg(2+) transport; Belongs to the membrane magnesium transporter (TC 1.A.67) family.
   
  
 0.499
Rhebl1
GTPase RhebL1; Binds GTP and exhibits intrinsic GTPase activity. May activate NF-kappa-B-mediated gene transcription. Promotes signal transduction through MTOR, activates RPS6KB1, and is a downstream target of the small GTPase-activating proteins TSC1 and TSC2 (By similarity).
   
  
 0.487
Ypel1
Protein yippee-like 1; May play a role in epithelioid conversion of fibroblasts.
   
  
 0.482
Btbd16
BTB/POZ domain-containing protein 16.
      
 0.478
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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