STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Speer4aSpermatogenesis-associated glutamate (E)-rich protein 4A. (267 aa)    
Predicted Functional Partners:
Gm10220
Predicted gene 10220.
  
   
0.792
Gm7347
Predicted gene 7347.
  
   
0.592
Speer4b
Spermatogenesis associated glutamate (E)-rich protein 4b.
  
   
0.571
Tcl1b4
Protein TCL1B4; Belongs to the TCL1 family.
   
 
 0.546
Gm1979
Predicted gene 1979.
  
   
0.543
Tcl1b3
Protein TCL1B3; Belongs to the TCL1 family.
   
 
 0.522
Oosp3
Oocyte-secreted protein 3; Belongs to the PLAC1 family.
   
  
 0.519
Fbxw14
F-box and WD-40 domain protein 14.
   
  
 0.517
Fbxw19
F-box and WD-40 domain protein 19.
      
 0.512
Fbxw21
F-box and WD-40 domain protein 21.
   
  
 0.495
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.