Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Efcab11 | Fam117b | ENSMUSP00000044808 | ENSMUSP00000041671 | EF-hand calcium-binding domain-containing protein 11. | Protein FAM117B. | 0.625 |
| Efcab11 | Rbm43 | ENSMUSP00000044808 | ENSMUSP00000099829 | EF-hand calcium-binding domain-containing protein 11. | RNA-binding protein 43. | 0.548 |
| Efcab11 | Tent5b | ENSMUSP00000044808 | ENSMUSP00000056015 | EF-hand calcium-binding domain-containing protein 11. | Terminal nucleotidyltransferase 5B; Probable nucleotidyltransferase that may act as a non- canonical poly(A) RNA polymerase. | 0.515 |
| Fam117b | Efcab11 | ENSMUSP00000041671 | ENSMUSP00000044808 | Protein FAM117B. | EF-hand calcium-binding domain-containing protein 11. | 0.625 |
| Fam117b | Rbm43 | ENSMUSP00000041671 | ENSMUSP00000099829 | Protein FAM117B. | RNA-binding protein 43. | 0.569 |
| Fam117b | Tent5b | ENSMUSP00000041671 | ENSMUSP00000056015 | Protein FAM117B. | Terminal nucleotidyltransferase 5B; Probable nucleotidyltransferase that may act as a non- canonical poly(A) RNA polymerase. | 0.432 |
| Iqsec3 | Rbm43 | ENSMUSP00000038653 | ENSMUSP00000099829 | IQ motif and SEC7 domain-containing protein 3; Acts as a guanine nucleotide exchange factor (GEF) for ARF1. Belongs to the BRAG family. | RNA-binding protein 43. | 0.595 |
| Kpnb1 | Rbm43 | ENSMUSP00000001479 | ENSMUSP00000099829 | Importin subunit beta-1; Functions in nuclear protein import, either in association with an adapter protein, like an importin-alpha subunit, which binds to nuclear localization signals (NLS) in cargo substrates, or by acting as autonomous nuclear transport receptor. Acting autonomously, serves itself as NLS receptor. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic [...] | RNA-binding protein 43. | 0.412 |
| Kpnb1 | Tardbp | ENSMUSP00000001479 | ENSMUSP00000081142 | Importin subunit beta-1; Functions in nuclear protein import, either in association with an adapter protein, like an importin-alpha subunit, which binds to nuclear localization signals (NLS) in cargo substrates, or by acting as autonomous nuclear transport receptor. Acting autonomously, serves itself as NLS receptor. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic [...] | TAR DNA-binding protein 43; RNA-binding protein that is involved in various steps of RNA biogenesis and processing. Preferentially binds, via its two RNA recognition motifs RRM1 and RRM2, to GU-repeats on RNA molecules predominantly localized within long introns and in the 3'UTR of mRNAs. In turn, regulates the splicing of many non-coding and protein-coding RNAs including proteins involved in neuronal survival, as well as mRNAs that encode proteins relevant for neurodegenerative diseases. Plays a role in maintaining mitochondrial homeostasis by regulating the processing of mitochondria [...] | 0.624 |
| Parp9 | Rbm43 | ENSMUSP00000110528 | ENSMUSP00000099829 | Protein mono-ADP-ribosyltransferase PARP9; ADP-ribosyltransferase which, in association with E3 ligase DTX3L, plays a role in DNA damage repair and in immune responses including interferon-mediated antiviral defenses. Within the complex, enhances DTX3L E3 ligase activity which is further enhanced by PARP9 binding to poly(ADP-ribose) (By similarity). In addition, positively regulates DTXL3 protein levels (By similarity). In association with DTX3L and in presence of E1 and E2 enzymes, mediates NAD(+)-dependent mono-ADP-ribosylation of ubiquitin which prevents ubiquitin conjugation to sub [...] | RNA-binding protein 43. | 0.462 |
| Rbm43 | Efcab11 | ENSMUSP00000099829 | ENSMUSP00000044808 | RNA-binding protein 43. | EF-hand calcium-binding domain-containing protein 11. | 0.548 |
| Rbm43 | Fam117b | ENSMUSP00000099829 | ENSMUSP00000041671 | RNA-binding protein 43. | Protein FAM117B. | 0.569 |
| Rbm43 | Iqsec3 | ENSMUSP00000099829 | ENSMUSP00000038653 | RNA-binding protein 43. | IQ motif and SEC7 domain-containing protein 3; Acts as a guanine nucleotide exchange factor (GEF) for ARF1. Belongs to the BRAG family. | 0.595 |
| Rbm43 | Kpnb1 | ENSMUSP00000099829 | ENSMUSP00000001479 | RNA-binding protein 43. | Importin subunit beta-1; Functions in nuclear protein import, either in association with an adapter protein, like an importin-alpha subunit, which binds to nuclear localization signals (NLS) in cargo substrates, or by acting as autonomous nuclear transport receptor. Acting autonomously, serves itself as NLS receptor. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic [...] | 0.412 |
| Rbm43 | Parp9 | ENSMUSP00000099829 | ENSMUSP00000110528 | RNA-binding protein 43. | Protein mono-ADP-ribosyltransferase PARP9; ADP-ribosyltransferase which, in association with E3 ligase DTX3L, plays a role in DNA damage repair and in immune responses including interferon-mediated antiviral defenses. Within the complex, enhances DTX3L E3 ligase activity which is further enhanced by PARP9 binding to poly(ADP-ribose) (By similarity). In addition, positively regulates DTXL3 protein levels (By similarity). In association with DTX3L and in presence of E1 and E2 enzymes, mediates NAD(+)-dependent mono-ADP-ribosylation of ubiquitin which prevents ubiquitin conjugation to sub [...] | 0.462 |
| Rbm43 | Rnd3 | ENSMUSP00000099829 | ENSMUSP00000017288 | RNA-binding protein 43. | Rho-related GTP-binding protein RhoE; Binds GTP but lacks intrinsic GTPase activity and is resistant to Rho-specific GTPase-activating proteins. | 0.663 |
| Rbm43 | Tardbp | ENSMUSP00000099829 | ENSMUSP00000081142 | RNA-binding protein 43. | TAR DNA-binding protein 43; RNA-binding protein that is involved in various steps of RNA biogenesis and processing. Preferentially binds, via its two RNA recognition motifs RRM1 and RRM2, to GU-repeats on RNA molecules predominantly localized within long introns and in the 3'UTR of mRNAs. In turn, regulates the splicing of many non-coding and protein-coding RNAs including proteins involved in neuronal survival, as well as mRNAs that encode proteins relevant for neurodegenerative diseases. Plays a role in maintaining mitochondrial homeostasis by regulating the processing of mitochondria [...] | 0.425 |
| Rbm43 | Tent5b | ENSMUSP00000099829 | ENSMUSP00000056015 | RNA-binding protein 43. | Terminal nucleotidyltransferase 5B; Probable nucleotidyltransferase that may act as a non- canonical poly(A) RNA polymerase. | 0.452 |
| Rbm43 | Tmco5 | ENSMUSP00000099829 | ENSMUSP00000028834 | RNA-binding protein 43. | Transmembrane and coiled-coil domain-containing protein 5A; Belongs to the TMCO5 family. | 0.412 |
| Rbm43 | Zc3hav1l | ENSMUSP00000099829 | ENSMUSP00000062475 | RNA-binding protein 43. | Zinc finger CCCH-type antiviral protein 1-like. | 0.523 |
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