Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fau | Gm2042 | ENSMUSP00000136358 | ENSMUSP00000105772 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | Predicted gene 2042. | 0.911 |
Fau | Mrpl12 | ENSMUSP00000136358 | ENSMUSP00000044417 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 39S ribosomal protein L12, mitochondrial; Belongs to the bacterial ribosomal protein bL12 family. | 0.415 |
Fau | Rpl23 | ENSMUSP00000136358 | ENSMUSP00000099435 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 60S ribosomal protein L23. | 0.999 |
Fau | Rps11 | ENSMUSP00000136358 | ENSMUSP00000003521 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 40S ribosomal protein S11. | 0.999 |
Fau | Rps15 | ENSMUSP00000136358 | ENSMUSP00000069004 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.999 |
Fau | Rps3 | ENSMUSP00000136358 | ENSMUSP00000032998 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit (By similarity). Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA (By similarity). Displays high binding affinity for 7,8-dihydro-8- oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS) (By similarity). Has also been shown to bind with similar affinity to intact and damaged DNA (By similarity). S [...] | 0.999 |
Gm2042 | Fau | ENSMUSP00000105772 | ENSMUSP00000136358 | Predicted gene 2042. | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 0.911 |
Gm2042 | Mrpl12 | ENSMUSP00000105772 | ENSMUSP00000044417 | Predicted gene 2042. | 39S ribosomal protein L12, mitochondrial; Belongs to the bacterial ribosomal protein bL12 family. | 0.677 |
Gm2042 | Mrpl17 | ENSMUSP00000105772 | ENSMUSP00000117971 | Predicted gene 2042. | 39S ribosomal protein L17, mitochondrial. | 0.678 |
Gm2042 | Mrpl36 | ENSMUSP00000105772 | ENSMUSP00000022098 | Predicted gene 2042. | 39S ribosomal protein L36, mitochondrial; Belongs to the bacterial ribosomal protein bL36 family. | 0.678 |
Gm2042 | Mrps9 | ENSMUSP00000105772 | ENSMUSP00000056855 | Predicted gene 2042. | 28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. | 0.677 |
Gm2042 | Rpl23 | ENSMUSP00000105772 | ENSMUSP00000099435 | Predicted gene 2042. | 60S ribosomal protein L23. | 0.678 |
Gm2042 | Rps11 | ENSMUSP00000105772 | ENSMUSP00000003521 | Predicted gene 2042. | 40S ribosomal protein S11. | 0.676 |
Gm2042 | Rps15 | ENSMUSP00000105772 | ENSMUSP00000069004 | Predicted gene 2042. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.676 |
Gm2042 | Rps3 | ENSMUSP00000105772 | ENSMUSP00000032998 | Predicted gene 2042. | 40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit (By similarity). Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA (By similarity). Displays high binding affinity for 7,8-dihydro-8- oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS) (By similarity). Has also been shown to bind with similar affinity to intact and damaged DNA (By similarity). S [...] | 0.676 |
Gm2042 | Tufm | ENSMUSP00000105772 | ENSMUSP00000095656 | Predicted gene 2042. | Elongation factor Tu, mitochondrial; Promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. Plays also a role in the regulation of autophagy and innate immunity. Recruits ATG5-ATG12 and NLRX1 at mitochondria and serves as a checkpoint of the RIG- I/DDX58-MAVS pathway. In turn, inhibits RLR-mediated type I interferon while promoting autophagy; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. | 0.677 |
Mrpl12 | Fau | ENSMUSP00000044417 | ENSMUSP00000136358 | 39S ribosomal protein L12, mitochondrial; Belongs to the bacterial ribosomal protein bL12 family. | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 0.415 |
Mrpl12 | Gm2042 | ENSMUSP00000044417 | ENSMUSP00000105772 | 39S ribosomal protein L12, mitochondrial; Belongs to the bacterial ribosomal protein bL12 family. | Predicted gene 2042. | 0.677 |
Mrpl12 | Mrpl17 | ENSMUSP00000044417 | ENSMUSP00000117971 | 39S ribosomal protein L12, mitochondrial; Belongs to the bacterial ribosomal protein bL12 family. | 39S ribosomal protein L17, mitochondrial. | 0.999 |
Mrpl12 | Mrpl36 | ENSMUSP00000044417 | ENSMUSP00000022098 | 39S ribosomal protein L12, mitochondrial; Belongs to the bacterial ribosomal protein bL12 family. | 39S ribosomal protein L36, mitochondrial; Belongs to the bacterial ribosomal protein bL36 family. | 0.999 |
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