Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| 5830411N06Rik | Skint1 | ENSMUSP00000131905 | ENSMUSP00000124737 | RIKEN cDNA 5830411N06 gene. | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | 0.401 |
| 5830411N06Rik | Sox13 | ENSMUSP00000131905 | ENSMUSP00000119729 | RIKEN cDNA 5830411N06 gene. | Transcription factor SOX-13; Binds to the sequence 5'-AACAAT-3'. | 0.606 |
| Egr3 | Skint1 | ENSMUSP00000153491 | ENSMUSP00000124737 | Early growth response protein 3; Probable transcription factor involved in muscle spindle development; Belongs to the EGR C2H2-type zinc-finger protein family. | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | 0.425 |
| Egr3 | Sox13 | ENSMUSP00000153491 | ENSMUSP00000119729 | Early growth response protein 3; Probable transcription factor involved in muscle spindle development; Belongs to the EGR C2H2-type zinc-finger protein family. | Transcription factor SOX-13; Binds to the sequence 5'-AACAAT-3'. | 0.409 |
| H60c | Jaml | ENSMUSP00000126536 | ENSMUSP00000052033 | Histocompatibility antigen 60c; Ligand for the KLRK1 immunosurveillance receptor. Binding to KLRK1 stimulates cell lysis in vitro. | Junctional adhesion molecule-like; Transmembrane protein of the plasma membrane of leukocytes that control their migration and activation through interaction with CXADR, a plasma membrane receptor found on adjacent epithelial and endothelial cells. The interaction between both receptors mediates the activation of gamma-delta T-cells, a subpopulation of T-cells residing in epithelia and involved in tissue homeostasis and repair. Upon epithelial CXADR-binding, JAML induces downstream cell signaling events in gamma-delta T-cells through PI3-kinase and MAP kinases. It results in proliferat [...] | 0.691 |
| H60c | Skint1 | ENSMUSP00000126536 | ENSMUSP00000124737 | Histocompatibility antigen 60c; Ligand for the KLRK1 immunosurveillance receptor. Binding to KLRK1 stimulates cell lysis in vitro. | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | 0.474 |
| Jaml | H60c | ENSMUSP00000052033 | ENSMUSP00000126536 | Junctional adhesion molecule-like; Transmembrane protein of the plasma membrane of leukocytes that control their migration and activation through interaction with CXADR, a plasma membrane receptor found on adjacent epithelial and endothelial cells. The interaction between both receptors mediates the activation of gamma-delta T-cells, a subpopulation of T-cells residing in epithelia and involved in tissue homeostasis and repair. Upon epithelial CXADR-binding, JAML induces downstream cell signaling events in gamma-delta T-cells through PI3-kinase and MAP kinases. It results in proliferat [...] | Histocompatibility antigen 60c; Ligand for the KLRK1 immunosurveillance receptor. Binding to KLRK1 stimulates cell lysis in vitro. | 0.691 |
| Jaml | Skint1 | ENSMUSP00000052033 | ENSMUSP00000124737 | Junctional adhesion molecule-like; Transmembrane protein of the plasma membrane of leukocytes that control their migration and activation through interaction with CXADR, a plasma membrane receptor found on adjacent epithelial and endothelial cells. The interaction between both receptors mediates the activation of gamma-delta T-cells, a subpopulation of T-cells residing in epithelia and involved in tissue homeostasis and repair. Upon epithelial CXADR-binding, JAML induces downstream cell signaling events in gamma-delta T-cells through PI3-kinase and MAP kinases. It results in proliferat [...] | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | 0.603 |
| Skint1 | 5830411N06Rik | ENSMUSP00000124737 | ENSMUSP00000131905 | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | RIKEN cDNA 5830411N06 gene. | 0.401 |
| Skint1 | Egr3 | ENSMUSP00000124737 | ENSMUSP00000153491 | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | Early growth response protein 3; Probable transcription factor involved in muscle spindle development; Belongs to the EGR C2H2-type zinc-finger protein family. | 0.425 |
| Skint1 | H60c | ENSMUSP00000124737 | ENSMUSP00000126536 | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | Histocompatibility antigen 60c; Ligand for the KLRK1 immunosurveillance receptor. Binding to KLRK1 stimulates cell lysis in vitro. | 0.474 |
| Skint1 | Jaml | ENSMUSP00000124737 | ENSMUSP00000052033 | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | Junctional adhesion molecule-like; Transmembrane protein of the plasma membrane of leukocytes that control their migration and activation through interaction with CXADR, a plasma membrane receptor found on adjacent epithelial and endothelial cells. The interaction between both receptors mediates the activation of gamma-delta T-cells, a subpopulation of T-cells residing in epithelia and involved in tissue homeostasis and repair. Upon epithelial CXADR-binding, JAML induces downstream cell signaling events in gamma-delta T-cells through PI3-kinase and MAP kinases. It results in proliferat [...] | 0.603 |
| Skint1 | Sox13 | ENSMUSP00000124737 | ENSMUSP00000119729 | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | Transcription factor SOX-13; Binds to the sequence 5'-AACAAT-3'. | 0.609 |
| Sox13 | 5830411N06Rik | ENSMUSP00000119729 | ENSMUSP00000131905 | Transcription factor SOX-13; Binds to the sequence 5'-AACAAT-3'. | RIKEN cDNA 5830411N06 gene. | 0.606 |
| Sox13 | Egr3 | ENSMUSP00000119729 | ENSMUSP00000153491 | Transcription factor SOX-13; Binds to the sequence 5'-AACAAT-3'. | Early growth response protein 3; Probable transcription factor involved in muscle spindle development; Belongs to the EGR C2H2-type zinc-finger protein family. | 0.409 |
| Sox13 | Skint1 | ENSMUSP00000119729 | ENSMUSP00000124737 | Transcription factor SOX-13; Binds to the sequence 5'-AACAAT-3'. | Selection and upkeep of intraepithelial T-cells protein 1; May act by engaging a cell surface molecule on immature T- cells in the embryonic thymus. Plays a central role in mediating key epithelial-immune interactions by being involved in the selection of Vgamma5(+)Vdelta1(+) T-cells, which constitute 90% of epidermal gammadelta T-cells. | 0.609 |