STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm5916Predicted gene 5916. (102 aa)    
Predicted Functional Partners:
Pate10
Secreted TFP/Ly-6/uPAR protein PATE-N.
   
  
 0.734
Pate13
Prostate and testis-expressed 13.
      
 0.691
Pate3
Prostate and testis expressed protein 3.
      
 0.662
Pate11
Secreted TFP/Ly-6/uPAR protein PATE-P.
      
 0.660
Pate4
Prostate and testis expressed protein 4; Enhances sperm motility. Binds to calmodulin and inhibits calcium transport into spermatozoa. May modulate the function of nicotinic acetylcholine receptors.
      
 0.552
Pate7
Prostate and testis-expressed 7.
   
  
 0.549
Ddx25
ATP-dependent RNA helicase DDX25; ATP-dependent RNA helicase. Required for mRNA export and translation regulation during spermatid development.
      
 0.538
Cmtm2b
CKLF-like MARVEL transmembrane domain-containing protein 2B; Belongs to the chemokine-like factor family.
      
 0.489
Cst13
Cystatin-13; May perform a specialized role during sperm development and maturation; Belongs to the cystatin family.
      
 0.441
Pate2
Prostate and testis expressed protein 2.
      
 0.433
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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