STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc15a5Solute carrier family 15 member 5; Proton oligopeptide cotransporter. (566 aa)    
Predicted Functional Partners:
4930523C07Rik
RIKEN cDNA 4930523C07 gene.
      
 0.577
Dcdc2b
Doublecortin domain-containing 2b.
      
 0.572
Slc13a5
Solute carrier family 13 member 5; High-affinity sodium/citrate cotransporter that mediates citrate entry into cells. The transport process is electrogenic; it is the trivalent form of citrate rather than the divalent form that is recognized as a substrate. May facilitate the utilization of circulating citrate for the generation of metabolic energy and for the synthesis of fatty acids and cholesterol (By similarity). Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. NADC subfamily.
   
  
 0.519
Slc35f5
Solute carrier family 35 member F5; Putative solute transporter; Belongs to the SLC35F solute transporter family.
  
  
 0.495
Mfsd6l
Major facilitator superfamily domain-containing protein 6-like.
      
 0.487
Zfp985
Zinc finger protein 985.
      
 0.487
Efcab6
EF-hand calcium-binding domain-containing protein 6; Negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonizes this inhibition by abrogation of this complex.
   
  
 0.471
Tmem268
Transmembrane protein 268.
      
 0.456
Tmem267
Transmembrane protein 267.
      
 0.451
Wdr38
WD repeat-containing protein 38.
    
 
 0.451
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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