STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4931406C07RikEster hydrolase C11orf54 homolog; Exhibits ester hydrolase activity on the substrate p- nitrophenyl acetate. (315 aa)    
Predicted Functional Partners:
2310039H08Rik
Uncharacterized protein C6orf226 homolog.
   
  
 0.611
Vstm5
V-set and transmembrane domain-containing protein 5; Cell adhesion-like membrane protein of the central nervous system (CNS) which modulates both the position and complexity of central neurons by altering their membrane morphology and dynamics. Involved in the formation of neuronal dendrites and protrusions including dendritic filopodia. In synaptogenesis, regulates synapse formation by altering dendritic spine morphology and actin distribution. Promotes formation of unstable neuronal spines such as thin and branched types. Regulates neuronal morphogenesis and migration during cortical [...]
      
 0.609
AU022252
Uncharacterized protein C1orf50 homolog.
   
  
 0.607
BC031181
UPF0729 protein C18orf32 homolog; May activate the NF-kappa-B signaling pathway.
   
  
 0.554
2310011J03Rik
UPF0449 protein C19orf25 homolog; Belongs to the UPF0449 family.
      
 0.520
Tm4sf5
Transmembrane 4 superfamily member 5.
      
 0.515
1700067K01Rik
UPF0575 protein C19orf67 homolog; Belongs to the UPF0575 family.
      
 0.511
Smco4
Single-pass membrane and coiled-coil domain-containing protein 4.
   
  
 0.500
1700037H04Rik
UPF0687 protein C20orf27 homolog; Belongs to the UPF0687 family.
   
  
 0.496
2310022B05Rik
Uncharacterized protein C1orf198 homolog.
   
  
 0.492
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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