STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btbd35f23BTB domain-containing 35, family member 23. (498 aa)    
Predicted Functional Partners:
Smok3b
Sperm motility kinase 3B.
   
  
 0.698
H2al1m
Histone H2A; Belongs to the histone H2A family.
      
 0.692
Smok3c
Sperm motility kinase 3C.
      
 0.692
Slx
Sycp3-like X-linked.
   
  
 0.682
Samt4
Spermatogenesis-associated multipass transmembrane protein 4.
   
  
 0.679
Slxl1
Slx-like 1.
   
  
 0.663
H2ab3
Histone H2A; Belongs to the histone H2A family.
   
  
 0.654
Smok3a
Sperm motility kinase 3A; May play a role in sperm motility, especially in the regulation of flagellar function; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. Smok subfamily.
      
 0.648
Actrt1
Actin-related protein T1; Negatively regulates the Hedgehog (SHH) signaling. Binds to the promoter of the SHH signaling mediator, GLI1, and inhibits its expression; Belongs to the actin family.
   
  
 0.638
Spin2d
Spindlin family, member 2D.
   
  
 0.616
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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