STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm9508Predicted gene 9508. (230 aa)    
Predicted Functional Partners:
Gm9736
Predicted gene 9736.
  
 
0.484
Gm19668
Predicted gene, 19668.
  
 
 
0.445
Krtap10-4
Keratin associated protein 10-4.
  
 
 
0.422
Krtap10-10
Keratin-associated protein 10-10.
  
 
 
0.422
Gm3285
Predicted gene 3285.
  
 
 
0.422
Gm10318
Predicted gene 10318.
  
 
 
0.421
Gm19402
Predicted gene, 19402.
  
  
 
0.406
Gm18596
Predicted gene, 18596.
  
  
 
0.406
Gm3233
Predicted gene 3233.
  
  
 
0.405
Gm3238
Predicted gene 3238.
  
  
 
0.405
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.