Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dpep3 | Ly6k | MGP_PahariEiJ_P0054117 | MGP_PahariEiJ_P0041839 | Membrane dipeptidase. | Lymphocyte antigen 6K. | 0.504 |
Dpep3 | MGP_PahariEiJ_P0055273 | MGP_PahariEiJ_P0054117 | MGP_PahariEiJ_P0055273 | Membrane dipeptidase. | annotation not available | 0.421 |
Dpep3 | Spaca4 | MGP_PahariEiJ_P0054117 | MGP_PahariEiJ_P0016471 | Membrane dipeptidase. | Sperm acrosome membrane-associated protein 4. | 0.505 |
Dpep3 | Tex101 | MGP_PahariEiJ_P0054117 | MGP_PahariEiJ_P0046286 | Membrane dipeptidase. | Testis-expressed protein 101. | 0.666 |
Fam71f1 | Spaca4 | MGP_PahariEiJ_P0049041 | MGP_PahariEiJ_P0016471 | Protein FAM71F1 isoform X1. | Sperm acrosome membrane-associated protein 4. | 0.558 |
Fam71f1 | Spata3 | MGP_PahariEiJ_P0049041 | MGP_PahariEiJ_P0074088 | Protein FAM71F1 isoform X1. | Spermatogenesis-associated protein 3 isoform X1. | 0.573 |
Fam71f1 | Tmem225 | MGP_PahariEiJ_P0049041 | MGP_PahariEiJ_P0023061 | Protein FAM71F1 isoform X1. | Transmembrane protein 225. | 0.574 |
Ly6k | Dpep3 | MGP_PahariEiJ_P0041839 | MGP_PahariEiJ_P0054117 | Lymphocyte antigen 6K. | Membrane dipeptidase. | 0.504 |
Ly6k | Lypd4 | MGP_PahariEiJ_P0041839 | MGP_PahariEiJ_P0046292 | Lymphocyte antigen 6K. | Ly6/PLAUR domain-containing protein 4. | 0.549 |
Ly6k | MGP_PahariEiJ_P0055273 | MGP_PahariEiJ_P0041839 | MGP_PahariEiJ_P0055273 | Lymphocyte antigen 6K. | annotation not available | 0.400 |
Ly6k | Spaca4 | MGP_PahariEiJ_P0041839 | MGP_PahariEiJ_P0016471 | Lymphocyte antigen 6K. | Sperm acrosome membrane-associated protein 4. | 0.596 |
Ly6k | Tex101 | MGP_PahariEiJ_P0041839 | MGP_PahariEiJ_P0046286 | Lymphocyte antigen 6K. | Testis-expressed protein 101. | 0.724 |
Lypd4 | Ly6k | MGP_PahariEiJ_P0046292 | MGP_PahariEiJ_P0041839 | Ly6/PLAUR domain-containing protein 4. | Lymphocyte antigen 6K. | 0.549 |
Lypd4 | Pate3 | MGP_PahariEiJ_P0046292 | MGP_PahariEiJ_P0022874 | Ly6/PLAUR domain-containing protein 4. | Prostate and testis expressed protein 3. | 0.561 |
Lypd4 | Spaca4 | MGP_PahariEiJ_P0046292 | MGP_PahariEiJ_P0016471 | Ly6/PLAUR domain-containing protein 4. | Sperm acrosome membrane-associated protein 4. | 0.552 |
Lypd5 | Pate3 | MGP_PahariEiJ_P0046236 | MGP_PahariEiJ_P0022874 | Ly6/PLAUR domain-containing protein 5. | Prostate and testis expressed protein 3. | 0.557 |
Lypd5 | Spaca4 | MGP_PahariEiJ_P0046236 | MGP_PahariEiJ_P0016471 | Ly6/PLAUR domain-containing protein 5. | Sperm acrosome membrane-associated protein 4. | 0.552 |
Lypd5 | Tex101 | MGP_PahariEiJ_P0046236 | MGP_PahariEiJ_P0046286 | Ly6/PLAUR domain-containing protein 5. | Testis-expressed protein 101. | 0.592 |
MGP_PahariEiJ_P0055273 | Dpep3 | MGP_PahariEiJ_P0055273 | MGP_PahariEiJ_P0054117 | annotation not available | Membrane dipeptidase. | 0.421 |
MGP_PahariEiJ_P0055273 | Ly6k | MGP_PahariEiJ_P0055273 | MGP_PahariEiJ_P0041839 | annotation not available | Lymphocyte antigen 6K. | 0.400 |
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