STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc6a5Solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9. (791 aa)    
Predicted Functional Partners:
Glra1
Glycine receptor subunit alpha-1 isoform X1.
   
  
 0.664
Gars
Glycyl-tRNA synthetase.
      
 0.620
MGP_PahariEiJ_P0063182
Glutamate decarboxylase 1-like.
   
  
 0.597
Slc32a1
Solute carrier family 32 (vesicular inhibitory amino acid transporter).
   
  
 0.579
Slc17a6
Vesicular glutamate transporter 2.
   
  
 0.572
Gad2
Glutamate decarboxylase 2.
   
  
 0.516
Glrb
Glycine receptor subunit beta isoform X1.
   
  
 0.510
Gphn
Gephyrin.
   
  
 0.508
Stx1a
Syntaxin 1A.
    
 
 0.450
Trmt1l
TRMT1-like protein isoform X1.
      
 0.440
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.