STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam189a1Protein FAM189A1. (515 aa)    
Predicted Functional Partners:
Tmem88b
Transmembrane protein 88B.
      
 0.616
Amer3
APC membrane recruitment protein 3.
   
  
 0.580
Tmem145
Transmembrane protein 145 isoform X1.
      
 0.574
Fam171b
Protein FAM171B.
      
 0.568
Fam81a
Protein FAM81A.
      
 0.562
Fam131b
Protein FAM131B isoform X1.
      
 0.562
Tmem91
Transmembrane protein 91 isoform X1.
      
 0.559
Tmem59l
Transmembrane protein 59-like.
   
 0.536
Rab3il1
Guanine nucleotide exchange factor for Rab-3A isoform X1.
    
 0.533
Rab3ip
RAB3A interacting protein.
    
 0.533
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.