Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Egfr | Folr1 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0017860 | Epidermal growth factor receptor isoform X1. | Folate receptor alpha isoform X1. | 0.464 |
Egfr | Folr2 | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0017856 | Epidermal growth factor receptor isoform X1. | Folate receptor beta. | 0.565 |
Egfr | Izumo1r | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0022428 | Epidermal growth factor receptor isoform X1. | Sperm-egg fusion protein Juno. | 0.562 |
Egfr | Tfrc | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0028677 | Epidermal growth factor receptor isoform X1. | Transferrin receptor protein 1. | 0.663 |
Folr1 | Egfr | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0030207 | Folate receptor alpha isoform X1. | Epidermal growth factor receptor isoform X1. | 0.464 |
Folr1 | Folr2 | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0017856 | Folate receptor alpha isoform X1. | Folate receptor beta. | 0.901 |
Folr1 | Gnmt | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0044569 | Folate receptor alpha isoform X1. | Glycine N-methyltransferase isoform X1. | 0.504 |
Folr1 | Izumo1 | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0016440 | Folate receptor alpha isoform X1. | Izumo sperm-egg fusion protein 1. | 0.732 |
Folr1 | Izumo1r | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0022428 | Folate receptor alpha isoform X1. | Sperm-egg fusion protein Juno. | 0.903 |
Folr1 | Slc19a1 | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0086697 | Folate receptor alpha isoform X1. | Solute carrier family 19 (folate transporter), member 1. | 0.476 |
Folr1 | Slc46a1 | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0035314 | Folate receptor alpha isoform X1. | MFS transporter, PCFT/HCP family, solute carrier family 46 (folate transporter), member 1. | 0.624 |
Folr1 | Tfrc | MGP_PahariEiJ_P0017860 | MGP_PahariEiJ_P0028677 | Folate receptor alpha isoform X1. | Transferrin receptor protein 1. | 0.461 |
Folr2 | Egfr | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0030207 | Folate receptor beta. | Epidermal growth factor receptor isoform X1. | 0.565 |
Folr2 | Folr1 | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0017860 | Folate receptor beta. | Folate receptor alpha isoform X1. | 0.901 |
Folr2 | Gnmt | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0044569 | Folate receptor beta. | Glycine N-methyltransferase isoform X1. | 0.497 |
Folr2 | Izumo1 | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0016440 | Folate receptor beta. | Izumo sperm-egg fusion protein 1. | 0.703 |
Folr2 | Izumo1r | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0022428 | Folate receptor beta. | Sperm-egg fusion protein Juno. | 0.903 |
Folr2 | Slc19a1 | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0086697 | Folate receptor beta. | Solute carrier family 19 (folate transporter), member 1. | 0.634 |
Folr2 | Slc46a1 | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0035314 | Folate receptor beta. | MFS transporter, PCFT/HCP family, solute carrier family 46 (folate transporter), member 1. | 0.574 |
Folr2 | Tfrc | MGP_PahariEiJ_P0017856 | MGP_PahariEiJ_P0028677 | Folate receptor beta. | Transferrin receptor protein 1. | 0.559 |
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