Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Actb | Itgb1 | MGP_PahariEiJ_P0060155 | MGP_PahariEiJ_P0054853 | Actin, cytoplasmic 1. | Integrin beta-1 isoform X1. | 0.971 |
Actb | Parva | MGP_PahariEiJ_P0060155 | MGP_PahariEiJ_P0018413 | Actin, cytoplasmic 1. | Alpha-parvin isoform X1. | 0.911 |
Actb | Parvb | MGP_PahariEiJ_P0060155 | MGP_PahariEiJ_P0042644 | Actin, cytoplasmic 1. | Beta-parvin. | 0.909 |
Actb | Parvg | MGP_PahariEiJ_P0060155 | MGP_PahariEiJ_P0042652 | Actin, cytoplasmic 1. | Gamma-parvin. | 0.904 |
Actb | Pxn | MGP_PahariEiJ_P0060155 | MGP_PahariEiJ_P0058389 | Actin, cytoplasmic 1. | LOW QUALITY PROTEIN: paxillin. | 0.952 |
Ilk | Itgb1 | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0054853 | Integrin-linked protein kinase isoform X1. | Integrin beta-1 isoform X1. | 0.998 |
Ilk | Lims1 | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0086105 | Integrin-linked protein kinase isoform X1. | LIM and senescent cell antigen-like-containing domain protein 1 isoform X1. | 0.998 |
Ilk | Lims2 | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0038828 | Integrin-linked protein kinase isoform X1. | LIM and senescent cell antigen-like-containing domain protein 1/2. | 0.949 |
Ilk | Parva | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0018413 | Integrin-linked protein kinase isoform X1. | Alpha-parvin isoform X1. | 0.999 |
Ilk | Parvb | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0042644 | Integrin-linked protein kinase isoform X1. | Beta-parvin. | 0.998 |
Ilk | Parvg | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0042652 | Integrin-linked protein kinase isoform X1. | Gamma-parvin. | 0.996 |
Ilk | Pxn | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0058389 | Integrin-linked protein kinase isoform X1. | LOW QUALITY PROTEIN: paxillin. | 0.986 |
Ilk | Rsu1 | MGP_PahariEiJ_P0018173 | MGP_PahariEiJ_P0060676 | Integrin-linked protein kinase isoform X1. | Ras suppressor protein 1 isoform X1. | 0.888 |
Itgb1 | Actb | MGP_PahariEiJ_P0054853 | MGP_PahariEiJ_P0060155 | Integrin beta-1 isoform X1. | Actin, cytoplasmic 1. | 0.971 |
Itgb1 | Ilk | MGP_PahariEiJ_P0054853 | MGP_PahariEiJ_P0018173 | Integrin beta-1 isoform X1. | Integrin-linked protein kinase isoform X1. | 0.998 |
Itgb1 | Lims1 | MGP_PahariEiJ_P0054853 | MGP_PahariEiJ_P0086105 | Integrin beta-1 isoform X1. | LIM and senescent cell antigen-like-containing domain protein 1 isoform X1. | 0.465 |
Itgb1 | Parva | MGP_PahariEiJ_P0054853 | MGP_PahariEiJ_P0018413 | Integrin beta-1 isoform X1. | Alpha-parvin isoform X1. | 0.856 |
Itgb1 | Parvb | MGP_PahariEiJ_P0054853 | MGP_PahariEiJ_P0042644 | Integrin beta-1 isoform X1. | Beta-parvin. | 0.787 |
Itgb1 | Parvg | MGP_PahariEiJ_P0054853 | MGP_PahariEiJ_P0042652 | Integrin beta-1 isoform X1. | Gamma-parvin. | 0.769 |
Itgb1 | Pxn | MGP_PahariEiJ_P0054853 | MGP_PahariEiJ_P0058389 | Integrin beta-1 isoform X1. | LOW QUALITY PROTEIN: paxillin. | 0.990 |
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