STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rps13Small subunit ribosomal protein S13e. (151 aa)    
Predicted Functional Partners:
Rps16
40S ribosomal protein S16 isoform X1.
   
 0.999
Rps11
Small subunit ribosomal protein S11e.
  
 0.999
Rps17
Small subunit ribosomal protein S17e.
   
 0.999
Rps3
Small subunit ribosomal protein S3e.
   
 0.999
MGP_PahariEiJ_P0020720
annotation not available
   
 0.999
MGP_PahariEiJ_P0020721
annotation not available
   
 0.999
Rps25
Small subunit ribosomal protein S25e.
   
 0.999
Rpsa
Ribosomal protein SA.
  
 0.999
Rps23
Small subunit ribosomal protein S23e.
   
 0.999
Rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.999
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.