STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmc5Transmembrane channel-like protein 5 isoform X1. (965 aa)    
Predicted Functional Partners:
Wscd1
WSC domain-containing protein 1.
    
 0.601
Ankrd66
Ankyrin repeat domain-containing protein 66.
   
 0.531
Lrrc71
Leucine-rich repeat-containing protein 71.
    
 0.506
Tmem191c
Transmembrane protein 191C.
      
 0.478
Efhb
EF-hand domain-containing family member B.
    
 
 0.467
Rnf213
E3 ubiquitin-protein ligase RNF213.
   
 0.436
Cfap70
Cilia- and flagella-associated protein 70 isoform X1.
    
 0.436
Mysm1
Histone H2A deubiquitinase MYSM1.
    
 0.428
Tmem221
Transmembrane protein 221 isoform X1.
      
 0.422
Tbc1d14
TBC1 domain family member 14 isoform X1.
      
 0.420
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.