STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcmt1[phosphatase 2A protein]-leucine-carboxy methyltransferase. (332 aa)    
Predicted Functional Partners:
Ppp2cb
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform isoform X1.
    
 0.928
Ppp2ca
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
    
 0.877
Ppp4c
Serine/threonine-protein phosphatase 4 catalytic subunit isoform X1.
    
 0.776
Ppp2r2a
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
 0.733
Ppme1
Protein phosphatase methylesterase 1 isoform X1.
      
 0.732
Ppp2r2b
Serine/threonine-protein phosphatase 2A regulatory subunit B.
    
 0.695
Ppp2r1b
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1.
    
 0.683
Ppp2r1a
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1.
    
 0.683
Ptpa
Serine/threonine-protein phosphatase 2A activator.
    
 
 0.673
Ppp4r1
Serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1.
    
 0.593
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.