STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nupr1Nuclear protein, 1. (80 aa)    
Predicted Functional Partners:
Trp53inp1
Tumor protein p53-inducible nuclear protein 1 isoform X1.
      
 0.594
Trp53
Cellular tumor antigen p53 isoform X1.
    
 
 0.583
Trib3
Tribbles homolog 3.
   
  
 0.507
MGP_PahariEiJ_P0074133
Prothymosin alpha isoform X1.
    
 
 0.444
Rabep2
Rab GTPase-binding effector protein 2.
      
 0.422
Sgf29
SAGA-associated factor 29.
      
 0.418
Il1b
Interleukin-1 beta isoform X1.
      
 0.418
Rnf2
E3 ubiquitin-protein ligase RNF1/2.
    
 
 0.405
Nsa2
Ribosome biogenesis protein NSA2 homolog.
    
 
 0.402
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.