STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vkorc1Vitamin K epoxide reductase complex subunit 1 isoform X1. (161 aa)    
Predicted Functional Partners:
Ggcx
Vitamin K-dependent gamma-carboxylase isoform X1.
   
 
 0.965
Nqo1
NAD(P)H dehydrogenase [quinone] 1.
     
 0.928
Xpr1
Xenotropic and polytropic retrovirus receptor 1 isoform X1.
      
 0.820
Rnpc3
U11/U12 small nuclear ribonucleoprotein 65 kDa protein.
      
 0.671
LOC110334948
DNA dC->dU-editing enzyme APOBEC-3-like isoform X1.
      
 0.670
Cyp4f14
Leukotriene-B4 omega-hydroxylase 3.
   
  
 0.567
Epas1
Endothelial PAS domain-containing protein 1.
   
  
 0.564
Tpmt
Thiopurine S-methyltransferase isoform X1.
      
 0.518
Pros1
Vitamin K-dependent protein S.
   
  
 0.447
Tram1
Translocating chain-associated membrane protein 1 isoform X1.
      
 0.418
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.