STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prap1Proline-rich acidic protein 1. (150 aa)    
Predicted Functional Partners:
Tmem54
Transmembrane protein 54 isoform X1.
      
 0.495
Gm7694
Uncharacterized protein C1orf226 homolog.
  
   
 0.447
Rpp40
Ribonuclease P protein subunit p40 isoform X1.
      
 0.426
Tmem184b
Transmembrane protein 184B isoform X1.
      
 0.422
Rpl37a
Large subunit ribosomal protein L37Ae.
      
 0.414
Pram1
PML-RARA-regulated adapter molecule 1.
  
     0.410
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.