STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Frmd8FERM domain-containing protein 8. (463 aa)    
Predicted Functional Partners:
Itgb1bp1
Integrin beta-1-binding protein 1.
    
 
 0.723
Rhbdf2
Inactive rhomboid protein 2 isoform X1.
     
 0.683
Tigd3
Tigger transposable element-derived protein 3.
      
 0.618
Ehbp1l1
EH domain-binding protein 1-like protein 1 isoform X1.
      
 0.561
Rhbdf1
Inactive rhomboid protein 1 isoform X1.
     
 0.520
Slc25a45
Solute carrier family 25 member 45 isoform X1.
      
 0.505
MGP_PahariEiJ_P0044285
annotation not available
      
 0.497
Fam89b
Protein FAM89B isoform X1.
      
 0.478
Fndc7
Fibronectin type III domain-containing protein 7 isoform X1.
      
 0.465
C23H12orf43
Uncharacterized protein C12orf43 homolog.
   
    0.453
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.