Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Araf | Hnrnpul2 | MGP_PahariEiJ_P0088765 | MGP_PahariEiJ_P0021048 | A-Raf proto-oncogene serine/threonine-protein kinase. | Heterogeneous nuclear ribonucleoprotein U-like protein 2. | 0.674 |
Hnrnpa0 | Hnrnpk | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0041219 | Heterogeneous nuclear ribonucleoprotein A0. | Heterogeneous nuclear ribonucleoprotein K isoform X1. | 0.831 |
Hnrnpa0 | Hnrnpul2 | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0021048 | Heterogeneous nuclear ribonucleoprotein A0. | Heterogeneous nuclear ribonucleoprotein U-like protein 2. | 0.747 |
Hnrnpa0 | Ncbp1 | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0077382 | Heterogeneous nuclear ribonucleoprotein A0. | Nuclear cap-binding protein subunit 1. | 0.744 |
Hnrnpa0 | Ncbp3 | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0034831 | Heterogeneous nuclear ribonucleoprotein A0. | Nuclear cap-binding protein subunit 3. | 0.521 |
Hnrnpa0 | Polr2a | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0034360 | Heterogeneous nuclear ribonucleoprotein A0. | DNA-directed RNA polymerase II subunit RPB1. | 0.473 |
Hnrnpa0 | Srsf1 | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0035825 | Heterogeneous nuclear ribonucleoprotein A0. | Serine/arginine-rich splicing factor 1 isoform X1. | 0.797 |
Hnrnpa0 | Tep1 | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0084587 | Heterogeneous nuclear ribonucleoprotein A0. | Telomerase protein component 1. | 0.435 |
Hnrnpa0 | Tra2b | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0028414 | Heterogeneous nuclear ribonucleoprotein A0. | Transformer-2 protein homolog beta isoform X1. | 0.671 |
Hnrnpa0 | Ttc41 | MGP_PahariEiJ_P0041207 | MGP_PahariEiJ_P0088298 | Heterogeneous nuclear ribonucleoprotein A0. | Tetratricopeptide repeat protein 41. | 0.421 |
Hnrnpk | Hnrnpa0 | MGP_PahariEiJ_P0041219 | MGP_PahariEiJ_P0041207 | Heterogeneous nuclear ribonucleoprotein K isoform X1. | Heterogeneous nuclear ribonucleoprotein A0. | 0.831 |
Hnrnpk | Hnrnpul2 | MGP_PahariEiJ_P0041219 | MGP_PahariEiJ_P0021048 | Heterogeneous nuclear ribonucleoprotein K isoform X1. | Heterogeneous nuclear ribonucleoprotein U-like protein 2. | 0.697 |
Hnrnpk | Ncbp1 | MGP_PahariEiJ_P0041219 | MGP_PahariEiJ_P0077382 | Heterogeneous nuclear ribonucleoprotein K isoform X1. | Nuclear cap-binding protein subunit 1. | 0.547 |
Hnrnpk | Polr2a | MGP_PahariEiJ_P0041219 | MGP_PahariEiJ_P0034360 | Heterogeneous nuclear ribonucleoprotein K isoform X1. | DNA-directed RNA polymerase II subunit RPB1. | 0.556 |
Hnrnpk | Srsf1 | MGP_PahariEiJ_P0041219 | MGP_PahariEiJ_P0035825 | Heterogeneous nuclear ribonucleoprotein K isoform X1. | Serine/arginine-rich splicing factor 1 isoform X1. | 0.895 |
Hnrnpk | Tra2b | MGP_PahariEiJ_P0041219 | MGP_PahariEiJ_P0028414 | Heterogeneous nuclear ribonucleoprotein K isoform X1. | Transformer-2 protein homolog beta isoform X1. | 0.822 |
Hnrnpul2 | Araf | MGP_PahariEiJ_P0021048 | MGP_PahariEiJ_P0088765 | Heterogeneous nuclear ribonucleoprotein U-like protein 2. | A-Raf proto-oncogene serine/threonine-protein kinase. | 0.674 |
Hnrnpul2 | Hnrnpa0 | MGP_PahariEiJ_P0021048 | MGP_PahariEiJ_P0041207 | Heterogeneous nuclear ribonucleoprotein U-like protein 2. | Heterogeneous nuclear ribonucleoprotein A0. | 0.747 |
Hnrnpul2 | Hnrnpk | MGP_PahariEiJ_P0021048 | MGP_PahariEiJ_P0041219 | Heterogeneous nuclear ribonucleoprotein U-like protein 2. | Heterogeneous nuclear ribonucleoprotein K isoform X1. | 0.697 |
Hnrnpul2 | Ncbp1 | MGP_PahariEiJ_P0021048 | MGP_PahariEiJ_P0077382 | Heterogeneous nuclear ribonucleoprotein U-like protein 2. | Nuclear cap-binding protein subunit 1. | 0.707 |
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