Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Agrn | Gpc1 | MGP_PahariEiJ_P0081563 | MGP_PahariEiJ_P0074443 | Agrin isoform X1. | Glypican 1. | 0.483 |
Agrn | Gpc3 | MGP_PahariEiJ_P0081563 | MGP_PahariEiJ_P0089079 | Agrin isoform X1. | Glypican-3 isoform X1. | 0.419 |
Agrn | Hpse2 | MGP_PahariEiJ_P0081563 | MGP_PahariEiJ_P0021820 | Agrin isoform X1. | Inactive heparanase-2 isoform X1. | 0.411 |
Agrn | Sdc1 | MGP_PahariEiJ_P0081563 | MGP_PahariEiJ_P0082008 | Agrin isoform X1. | Syndecan-1 isoform X1. | 0.614 |
Agrn | Sdc2 | MGP_PahariEiJ_P0081563 | MGP_PahariEiJ_P0041392 | Agrin isoform X1. | Syndecan 2. | 0.425 |
Agrn | Sdc3 | MGP_PahariEiJ_P0081563 | MGP_PahariEiJ_P0079842 | Agrin isoform X1. | Syndecan 3. | 0.491 |
Gpc1 | Agrn | MGP_PahariEiJ_P0074443 | MGP_PahariEiJ_P0081563 | Glypican 1. | Agrin isoform X1. | 0.483 |
Gpc1 | Gpc3 | MGP_PahariEiJ_P0074443 | MGP_PahariEiJ_P0089079 | Glypican 1. | Glypican-3 isoform X1. | 0.446 |
Gpc1 | Hpse2 | MGP_PahariEiJ_P0074443 | MGP_PahariEiJ_P0021820 | Glypican 1. | Inactive heparanase-2 isoform X1. | 0.411 |
Gpc1 | Sdc1 | MGP_PahariEiJ_P0074443 | MGP_PahariEiJ_P0082008 | Glypican 1. | Syndecan-1 isoform X1. | 0.974 |
Gpc1 | Sdc2 | MGP_PahariEiJ_P0074443 | MGP_PahariEiJ_P0041392 | Glypican 1. | Syndecan 2. | 0.957 |
Gpc1 | Sdc3 | MGP_PahariEiJ_P0074443 | MGP_PahariEiJ_P0079842 | Glypican 1. | Syndecan 3. | 0.626 |
Gpc3 | Agrn | MGP_PahariEiJ_P0089079 | MGP_PahariEiJ_P0081563 | Glypican-3 isoform X1. | Agrin isoform X1. | 0.419 |
Gpc3 | Gpc1 | MGP_PahariEiJ_P0089079 | MGP_PahariEiJ_P0074443 | Glypican-3 isoform X1. | Glypican 1. | 0.446 |
Gpc3 | Hpse2 | MGP_PahariEiJ_P0089079 | MGP_PahariEiJ_P0021820 | Glypican-3 isoform X1. | Inactive heparanase-2 isoform X1. | 0.411 |
Gpc3 | Sdc1 | MGP_PahariEiJ_P0089079 | MGP_PahariEiJ_P0082008 | Glypican-3 isoform X1. | Syndecan-1 isoform X1. | 0.595 |
Gpc3 | Sdc2 | MGP_PahariEiJ_P0089079 | MGP_PahariEiJ_P0041392 | Glypican-3 isoform X1. | Syndecan 2. | 0.484 |
Gpc3 | Sdc3 | MGP_PahariEiJ_P0089079 | MGP_PahariEiJ_P0079842 | Glypican-3 isoform X1. | Syndecan 3. | 0.593 |
Hpse | Hpse2 | MGP_PahariEiJ_P0032479 | MGP_PahariEiJ_P0021820 | Heparanase. | Inactive heparanase-2 isoform X1. | 0.903 |
Hpse | Ids | MGP_PahariEiJ_P0032479 | MGP_PahariEiJ_P0089221 | Heparanase. | Iduronate 2-sulfatase isoform X1. | 0.901 |
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