STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddi1DNA damage-inducible protein 1. (408 aa)    
Predicted Functional Partners:
Adrm1
26S proteasome regulatory subunit N13.
      
 0.696
Ubqln1
Ubiquilin-1 isoform X1.
   
 
 0.665
Aasdh
Acyl-CoA synthetase family member 4 isoform X1.
   
 
 0.649
Ulk2
Serine/threonine-protein kinase ULK2.
    
 0.627
Ulk1
Serine/threonine-protein kinase ULK1 isoform X1.
    
 0.627
Ubqln2
Ubiquilin 2.
   
 
 0.597
MGP_PahariEiJ_P0067589
annotation not available
      
 0.592
Rsc1a1
Regulatory solute carrier protein family 1 member 1.
 
  
 
 0.573
MGP_PahariEiJ_P0080714
annotation not available
 
  
 
 0.573
Nrip3
Nuclear receptor-interacting protein 3.
   
  
0.534
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.