STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmp12Matrix metalloproteinase-12 (macrophage elastase). (473 aa)    
Predicted Functional Partners:
Timp1
Metalloproteinase inhibitor 1 isoform X1.
   
 0.840
Timp2
Metalloproteinase inhibitor 2.
   
 0.797
Eln
Elastin.
   
 
 0.732
Timp3
Metalloproteinase inhibitor 3.
   
 0.722
Mmp7
Matrix metalloproteinase-7 (matrilysin, uterine).
  
0.676
Timp4
Metalloproteinase inhibitor 4.
    
 0.655
Elane
Neutrophil elastase.
   
 0.639
Col12a1
Collagen alpha-1(XII) chain isoform X1.
   
 0.637
Spp1
Secreted phosphoprotein 1.
   
 
 0.627
Ctss
Cathepsin S isoform X1.
   
 
 0.600
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.