STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Endod1Endonuclease domain-containing 1 protein. (501 aa)    
Predicted Functional Partners:
Tmem33
Transmembrane protein 33 isoform X1.
    
 
 0.585
Msl3l2
Male-specific lethal 3 homolog.
    
 0.549
Msl3
Male-specific lethal 3 homolog isoform X1.
    
 0.549
Msl2
E3 ubiquitin-protein ligase MSL2.
    
 0.528
Tmem43
Transmembrane protein 43.
    
 0.521
Rnf26
RING finger protein 26.
  
 
 
 0.518
MGP_PahariEiJ_P0023162
annotation not available
  
 
 
 0.518
Rbpjl
Recombining binding protein suppressor of hairless-like protein.
    
 0.491
Fam92a
Protein FAM92A isoform X1.
    
 0.452
Arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.436
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.