STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vps26bVacuolar protein sorting-associated protein 26B. (336 aa)    
Predicted Functional Partners:
Vps29
Vacuolar protein sorting-associated protein 29 isoform X1.
   
 0.997
Vps35
Vacuolar protein sorting-associated protein 35.
   
 0.996
Vps26a
Vacuolar protein sorting-associated protein 26A isoform X1.
  
 
0.995
Snx1
Sorting nexin-1/2.
   
 0.971
Snx2
Sorting nexin-2 isoform X1.
   
 0.962
Tbc1d5
TBC1 domain family member 5 isoform X1.
   
 0.958
Snx27
Sorting nexin-27 isoform X1.
   
 0.950
Snx3
Sorting nexin-3 isoform X1.
   
 0.923
Snx5
Sorting nexin-5/6/32.
    
 0.898
Snx6
Sorting nexin-5/6/32.
    
 0.887
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.