Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cxadr | Igsf5 | MGP_PahariEiJ_P0029435 | MGP_PahariEiJ_P0029883 | Coxsackievirus and adenovirus receptor isoform X1. | Immunoglobulin superfamily member 5 isoform X1. | 0.432 |
Cxadr | Jaml | MGP_PahariEiJ_P0029435 | MGP_PahariEiJ_P0023275 | Coxsackievirus and adenovirus receptor isoform X1. | Junctional adhesion molecule-like. | 0.999 |
Gramd1a | Jaml | MGP_PahariEiJ_P0015776 | MGP_PahariEiJ_P0023275 | GRAM domain-containing protein 1A isoform X1. | Junctional adhesion molecule-like. | 0.591 |
Gramd1a | Scn4b | MGP_PahariEiJ_P0015776 | MGP_PahariEiJ_P0023279 | GRAM domain-containing protein 1A isoform X1. | Voltage-gated sodium channel type IV beta. | 0.432 |
Gramd1b | Jaml | MGP_PahariEiJ_P0023074 | MGP_PahariEiJ_P0023275 | GRAM domain-containing protein 1B isoform X1. | Junctional adhesion molecule-like. | 0.585 |
Gramd1b | Scn4b | MGP_PahariEiJ_P0023074 | MGP_PahariEiJ_P0023279 | GRAM domain-containing protein 1B isoform X1. | Voltage-gated sodium channel type IV beta. | 0.404 |
Gramd1c | Gramd2 | MGP_PahariEiJ_P0029051 | MGP_PahariEiJ_P0023806 | GRAM domain-containing protein 1C. | GRAM domain-containing protein 2. | 0.447 |
Gramd1c | Gramd3 | MGP_PahariEiJ_P0029051 | MGP_PahariEiJ_P0039345 | GRAM domain-containing protein 1C. | GRAM domain-containing protein 3 isoform X1. | 0.586 |
Gramd1c | Jaml | MGP_PahariEiJ_P0029051 | MGP_PahariEiJ_P0023275 | GRAM domain-containing protein 1C. | Junctional adhesion molecule-like. | 0.585 |
Gramd1c | Scn4b | MGP_PahariEiJ_P0029051 | MGP_PahariEiJ_P0023279 | GRAM domain-containing protein 1C. | Voltage-gated sodium channel type IV beta. | 0.404 |
Gramd2 | Gramd1c | MGP_PahariEiJ_P0023806 | MGP_PahariEiJ_P0029051 | GRAM domain-containing protein 2. | GRAM domain-containing protein 1C. | 0.447 |
Gramd2 | Jaml | MGP_PahariEiJ_P0023806 | MGP_PahariEiJ_P0023275 | GRAM domain-containing protein 2. | Junctional adhesion molecule-like. | 0.585 |
Gramd2 | Scn4b | MGP_PahariEiJ_P0023806 | MGP_PahariEiJ_P0023279 | GRAM domain-containing protein 2. | Voltage-gated sodium channel type IV beta. | 0.404 |
Gramd3 | Gramd1c | MGP_PahariEiJ_P0039345 | MGP_PahariEiJ_P0029051 | GRAM domain-containing protein 3 isoform X1. | GRAM domain-containing protein 1C. | 0.586 |
Gramd3 | Jaml | MGP_PahariEiJ_P0039345 | MGP_PahariEiJ_P0023275 | GRAM domain-containing protein 3 isoform X1. | Junctional adhesion molecule-like. | 0.585 |
Gramd3 | Scn4b | MGP_PahariEiJ_P0039345 | MGP_PahariEiJ_P0023279 | GRAM domain-containing protein 3 isoform X1. | Voltage-gated sodium channel type IV beta. | 0.404 |
Igsf5 | Cxadr | MGP_PahariEiJ_P0029883 | MGP_PahariEiJ_P0029435 | Immunoglobulin superfamily member 5 isoform X1. | Coxsackievirus and adenovirus receptor isoform X1. | 0.432 |
Igsf5 | Jaml | MGP_PahariEiJ_P0029883 | MGP_PahariEiJ_P0023275 | Immunoglobulin superfamily member 5 isoform X1. | Junctional adhesion molecule-like. | 0.638 |
Jaml | Cxadr | MGP_PahariEiJ_P0023275 | MGP_PahariEiJ_P0029435 | Junctional adhesion molecule-like. | Coxsackievirus and adenovirus receptor isoform X1. | 0.999 |
Jaml | Gramd1a | MGP_PahariEiJ_P0023275 | MGP_PahariEiJ_P0015776 | Junctional adhesion molecule-like. | GRAM domain-containing protein 1A isoform X1. | 0.591 |
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