STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zbtb16Zinc finger and BTB domain-containing protein 16 isoform X1. (673 aa)    
Predicted Functional Partners:
Rara
Retinoic acid receptor alpha isoform X1.
    
 0.957
Ncor2
Nuclear receptor corepressor 2 isoform X1.
    
 0.871
Hdac1
Histone deacetylase 1/2.
    
 0.843
Ncor1
Nuclear receptor co-repressor 1.
    
 0.781
Bmi1
Polycomb group RING finger protein 4.
    
 0.769
Cul3
Cullin-3 isoform X1.
    
 0.754
Hdac4
Histone deacetylase 4 isoform X1.
   
 0.746
Hdac5
Histone deacetylase 5 isoform X1.
   
 0.718
Sin3a
Paired amphipathic helix protein Sin3a isoform X1.
    
 
 0.684
Gata3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.675
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.