STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SlnSarcolipin. (31 aa)    
Predicted Functional Partners:
Atp2a1
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 isoform X1.
   
 
 0.992
Atp2a2
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1.
   
 
 0.891
Atp2a3
Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X1.
   
 
 0.730
Pln
Cardiac phospholamban.
   
 
 0.696
Myl1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
  
 0.668
Mylpf
Myosin regulatory light chain 2, skeletal muscle isoform isoform X1.
   
  
 0.663
Myoz1
Myozenin-1.
   
  
 0.662
Myl2
Myosin regulatory light chain 2, ventricular/cardiac muscle isoform.
   
  
 0.635
Atp2c1
Calcium-transporting ATPase type 2C member 1 isoform X1.
   
 
 0.592
Atp2c2
Calcium-transporting ATPase type 2C member 2.
   
 
 0.592
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.