Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd276 | Cd28 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0073261 | Immune costimulatory protein B7-H3. | T-cell-specific surface glycoprotein CD28. | 0.746 |
Cd276 | Cd40 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0067146 | Immune costimulatory protein B7-H3. | Tumor necrosis factor receptor superfamily member 5 isoform X1. | 0.710 |
Cd276 | Cd40lg | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0089144 | Immune costimulatory protein B7-H3. | Tumor necrosis factor ligand superfamily member 5. | 0.751 |
Cd276 | Cd86 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0028854 | Immune costimulatory protein B7-H3. | T-lymphocyte activation antigen CD86. | 0.808 |
Cd276 | Ctla4 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0073264 | Immune costimulatory protein B7-H3. | Cytotoxic T-lymphocyte protein 4 isoform X1. | 0.742 |
Cd276 | Icos | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0073267 | Immune costimulatory protein B7-H3. | Inducible T-cell co-stimulator. | 0.732 |
Cd276 | Il2 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0068374 | Immune costimulatory protein B7-H3. | Interleukin 2. | 0.723 |
Cd276 | Il4 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0033415 | Immune costimulatory protein B7-H3. | Interleukin 4. | 0.698 |
Cd276 | Tnfrsf4 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0081534 | Immune costimulatory protein B7-H3. | Tumor necrosis factor receptor superfamily member 4. | 0.748 |
Cd276 | Tnfrsf9 | MGP_PahariEiJ_P0023765 | MGP_PahariEiJ_P0081078 | Immune costimulatory protein B7-H3. | Tumor necrosis factor receptor superfamily member 9 isoform X1. | 0.747 |
Cd28 | Cd276 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0023765 | T-cell-specific surface glycoprotein CD28. | Immune costimulatory protein B7-H3. | 0.746 |
Cd28 | Cd40 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0067146 | T-cell-specific surface glycoprotein CD28. | Tumor necrosis factor receptor superfamily member 5 isoform X1. | 0.497 |
Cd28 | Cd40lg | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0089144 | T-cell-specific surface glycoprotein CD28. | Tumor necrosis factor ligand superfamily member 5. | 0.731 |
Cd28 | Cd86 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0028854 | T-cell-specific surface glycoprotein CD28. | T-lymphocyte activation antigen CD86. | 0.996 |
Cd28 | Ctla4 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0073264 | T-cell-specific surface glycoprotein CD28. | Cytotoxic T-lymphocyte protein 4 isoform X1. | 0.718 |
Cd28 | Icos | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0073267 | T-cell-specific surface glycoprotein CD28. | Inducible T-cell co-stimulator. | 0.702 |
Cd28 | Il2 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0068374 | T-cell-specific surface glycoprotein CD28. | Interleukin 2. | 0.724 |
Cd28 | Il4 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0033415 | T-cell-specific surface glycoprotein CD28. | Interleukin 4. | 0.600 |
Cd28 | Tnfrsf4 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0081534 | T-cell-specific surface glycoprotein CD28. | Tumor necrosis factor receptor superfamily member 4. | 0.542 |
Cd28 | Tnfrsf9 | MGP_PahariEiJ_P0073261 | MGP_PahariEiJ_P0081078 | T-cell-specific surface glycoprotein CD28. | Tumor necrosis factor receptor superfamily member 9 isoform X1. | 0.466 |
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