STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bbs4Bardet-Biedl syndrome 4 protein. (520 aa)    
Predicted Functional Partners:
Bbs1
Bardet-Biedl syndrome 1 protein.
   
 0.999
Bbs9
Bardet-Biedl syndrome 9 protein.
   
 0.998
Bbs2
Bardet-Biedl syndrome 2 protein.
   
 0.998
Bbs5
Bardet-Biedl syndrome 5 protein isoform X1.
    
 0.997
Bbs7
Bardet-Biedl syndrome 7 protein.
   
 0.997
Ttc8
Tetratricopeptide repeat protein 8 isoform X1.
   
0.994
Lztfl1
Leucine zipper transcription factor-like protein 1.
   
 0.913
Pcm1
Pericentriolar material 1 protein isoform X1.
   
 
 0.889
Bbip1
BBSome-interacting protein 1.
    
 0.876
Klhl41
Kelch repeat and BTB domain-containing protein 5/10.
    
 0.846
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.