Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccnd3 | Cdk1 | MGP_PahariEiJ_P0044617 | MGP_PahariEiJ_P0086416 | G1/S-specific cyclin-D3 isoform X1. | Cyclin-dependent kinase 1 isoform X1. | 0.842 |
Ccnd3 | Mapk6 | MGP_PahariEiJ_P0044617 | MGP_PahariEiJ_P0024354 | G1/S-specific cyclin-D3 isoform X1. | Mitogen-activated protein kinase 4/6. | 0.912 |
Cdc14a | Cdk1 | MGP_PahariEiJ_P0071056 | MGP_PahariEiJ_P0086416 | Dual specificity protein phosphatase CDC14A isoform X1. | Cyclin-dependent kinase 1 isoform X1. | 0.655 |
Cdc14a | Mapk4 | MGP_PahariEiJ_P0071056 | MGP_PahariEiJ_P0039683 | Dual specificity protein phosphatase CDC14A isoform X1. | Mitogen-activated protein kinase 4/6. | 0.403 |
Cdc14a | Mapk6 | MGP_PahariEiJ_P0071056 | MGP_PahariEiJ_P0024354 | Dual specificity protein phosphatase CDC14A isoform X1. | Mitogen-activated protein kinase 4/6. | 0.680 |
Cdk1 | Ccnd3 | MGP_PahariEiJ_P0086416 | MGP_PahariEiJ_P0044617 | Cyclin-dependent kinase 1 isoform X1. | G1/S-specific cyclin-D3 isoform X1. | 0.842 |
Cdk1 | Cdc14a | MGP_PahariEiJ_P0086416 | MGP_PahariEiJ_P0071056 | Cyclin-dependent kinase 1 isoform X1. | Dual specificity protein phosphatase CDC14A isoform X1. | 0.655 |
Cdk1 | Mapk6 | MGP_PahariEiJ_P0086416 | MGP_PahariEiJ_P0024354 | Cyclin-dependent kinase 1 isoform X1. | Mitogen-activated protein kinase 4/6. | 0.849 |
Cdk1 | Xpo1 | MGP_PahariEiJ_P0086416 | MGP_PahariEiJ_P0030076 | Cyclin-dependent kinase 1 isoform X1. | Exportin-1. | 0.855 |
Kalrn | Mapk4 | MGP_PahariEiJ_P0028785 | MGP_PahariEiJ_P0039683 | Kalirin isoform X1. | Mitogen-activated protein kinase 4/6. | 0.509 |
Kalrn | Mapk6 | MGP_PahariEiJ_P0028785 | MGP_PahariEiJ_P0024354 | Kalirin isoform X1. | Mitogen-activated protein kinase 4/6. | 0.820 |
MGP_PahariEiJ_P0058656 | Mapk4 | MGP_PahariEiJ_P0058656 | MGP_PahariEiJ_P0039683 | annotation not available | Mitogen-activated protein kinase 4/6. | 0.694 |
MGP_PahariEiJ_P0058656 | Mapk6 | MGP_PahariEiJ_P0058656 | MGP_PahariEiJ_P0024354 | annotation not available | Mitogen-activated protein kinase 4/6. | 0.965 |
Mapk4 | Cdc14a | MGP_PahariEiJ_P0039683 | MGP_PahariEiJ_P0071056 | Mitogen-activated protein kinase 4/6. | Dual specificity protein phosphatase CDC14A isoform X1. | 0.403 |
Mapk4 | Kalrn | MGP_PahariEiJ_P0039683 | MGP_PahariEiJ_P0028785 | Mitogen-activated protein kinase 4/6. | Kalirin isoform X1. | 0.509 |
Mapk4 | MGP_PahariEiJ_P0058656 | MGP_PahariEiJ_P0039683 | MGP_PahariEiJ_P0058656 | Mitogen-activated protein kinase 4/6. | annotation not available | 0.694 |
Mapk4 | Mapk6 | MGP_PahariEiJ_P0039683 | MGP_PahariEiJ_P0024354 | Mitogen-activated protein kinase 4/6. | Mitogen-activated protein kinase 4/6. | 0.897 |
Mapk4 | Mapkapk5 | MGP_PahariEiJ_P0039683 | MGP_PahariEiJ_P0058657 | Mitogen-activated protein kinase 4/6. | Mitogen-activated protein kinase-activated protein kinase 5. | 0.756 |
Mapk4 | Ncoa3 | MGP_PahariEiJ_P0039683 | MGP_PahariEiJ_P0067226 | Mitogen-activated protein kinase 4/6. | Nuclear receptor coactivator 3. | 0.480 |
Mapk4 | Xpo1 | MGP_PahariEiJ_P0039683 | MGP_PahariEiJ_P0030076 | Mitogen-activated protein kinase 4/6. | Exportin-1. | 0.840 |
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