Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Camp | Ltf | MGP_PahariEiJ_P0025862 | MGP_PahariEiJ_P0026030 | Cathelicidin antimicrobial peptide. | Lactotransferrin. | 0.629 |
Camp | Ngp | MGP_PahariEiJ_P0025862 | MGP_PahariEiJ_P0025942 | Cathelicidin antimicrobial peptide. | Neutrophilic granule protein. | 0.933 |
Camp | S100a8 | MGP_PahariEiJ_P0025862 | MGP_PahariEiJ_P0069845 | Cathelicidin antimicrobial peptide. | Protein S100-A8. | 0.569 |
Camp | S100a9 | MGP_PahariEiJ_P0025862 | MGP_PahariEiJ_P0069848 | Cathelicidin antimicrobial peptide. | Protein S100-A9. | 0.644 |
Ltf | Camp | MGP_PahariEiJ_P0026030 | MGP_PahariEiJ_P0025862 | Lactotransferrin. | Cathelicidin antimicrobial peptide. | 0.629 |
Ltf | Ngp | MGP_PahariEiJ_P0026030 | MGP_PahariEiJ_P0025942 | Lactotransferrin. | Neutrophilic granule protein. | 0.481 |
Ltf | S100a8 | MGP_PahariEiJ_P0026030 | MGP_PahariEiJ_P0069845 | Lactotransferrin. | Protein S100-A8. | 0.509 |
MGP_PahariEiJ_P0015189 | Ngp | MGP_PahariEiJ_P0015189 | MGP_PahariEiJ_P0025942 | KRAB domain-containing zinc finger protein. | Neutrophilic granule protein. | 0.418 |
Ngp | Camp | MGP_PahariEiJ_P0025942 | MGP_PahariEiJ_P0025862 | Neutrophilic granule protein. | Cathelicidin antimicrobial peptide. | 0.933 |
Ngp | Ltf | MGP_PahariEiJ_P0025942 | MGP_PahariEiJ_P0026030 | Neutrophilic granule protein. | Lactotransferrin. | 0.481 |
Ngp | MGP_PahariEiJ_P0015189 | MGP_PahariEiJ_P0025942 | MGP_PahariEiJ_P0015189 | Neutrophilic granule protein. | KRAB domain-containing zinc finger protein. | 0.418 |
Ngp | S100a8 | MGP_PahariEiJ_P0025942 | MGP_PahariEiJ_P0069845 | Neutrophilic granule protein. | Protein S100-A8. | 0.534 |
Ngp | S100a9 | MGP_PahariEiJ_P0025942 | MGP_PahariEiJ_P0069848 | Neutrophilic granule protein. | Protein S100-A9. | 0.533 |
S100a8 | Camp | MGP_PahariEiJ_P0069845 | MGP_PahariEiJ_P0025862 | Protein S100-A8. | Cathelicidin antimicrobial peptide. | 0.569 |
S100a8 | Ltf | MGP_PahariEiJ_P0069845 | MGP_PahariEiJ_P0026030 | Protein S100-A8. | Lactotransferrin. | 0.509 |
S100a8 | Ngp | MGP_PahariEiJ_P0069845 | MGP_PahariEiJ_P0025942 | Protein S100-A8. | Neutrophilic granule protein. | 0.534 |
S100a8 | S100a9 | MGP_PahariEiJ_P0069845 | MGP_PahariEiJ_P0069848 | Protein S100-A8. | Protein S100-A9. | 0.994 |
S100a9 | Camp | MGP_PahariEiJ_P0069848 | MGP_PahariEiJ_P0025862 | Protein S100-A9. | Cathelicidin antimicrobial peptide. | 0.644 |
S100a9 | Ngp | MGP_PahariEiJ_P0069848 | MGP_PahariEiJ_P0025942 | Protein S100-A9. | Neutrophilic granule protein. | 0.533 |
S100a9 | S100a8 | MGP_PahariEiJ_P0069848 | MGP_PahariEiJ_P0069845 | Protein S100-A9. | Protein S100-A8. | 0.994 |