Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cask | Myo3a | MGP_PahariEiJ_P0088692 | MGP_PahariEiJ_P0060880 | Calcium/calmodulin-dependent serine protein kinase. | Myosin-IIIa. | 0.793 |
Cask | Vill | MGP_PahariEiJ_P0088692 | MGP_PahariEiJ_P0026197 | Calcium/calmodulin-dependent serine protein kinase. | Villin-like protein isoform X1. | 0.488 |
Cog3 | Cog4 | MGP_PahariEiJ_P0085508 | MGP_PahariEiJ_P0054273 | Conserved oligomeric Golgi complex subunit 3. | Conserved oligomeric Golgi complex subunit 4 isoform X1. | 0.991 |
Cog3 | Cog6 | MGP_PahariEiJ_P0085508 | MGP_PahariEiJ_P0068572 | Conserved oligomeric Golgi complex subunit 3. | Conserved oligomeric Golgi complex subunit 6 isoform X1. | 0.997 |
Cog3 | Cog8 | MGP_PahariEiJ_P0085508 | MGP_PahariEiJ_P0054173 | Conserved oligomeric Golgi complex subunit 3. | Conserved oligomeric Golgi complex subunit 8. | 0.997 |
Cog3 | Smim7 | MGP_PahariEiJ_P0085508 | MGP_PahariEiJ_P0047877 | Conserved oligomeric Golgi complex subunit 3. | Small integral membrane protein 7. | 0.909 |
Cog3 | Vill | MGP_PahariEiJ_P0085508 | MGP_PahariEiJ_P0026197 | Conserved oligomeric Golgi complex subunit 3. | Villin-like protein isoform X1. | 0.605 |
Cog4 | Cog3 | MGP_PahariEiJ_P0054273 | MGP_PahariEiJ_P0085508 | Conserved oligomeric Golgi complex subunit 4 isoform X1. | Conserved oligomeric Golgi complex subunit 3. | 0.991 |
Cog4 | Cog6 | MGP_PahariEiJ_P0054273 | MGP_PahariEiJ_P0068572 | Conserved oligomeric Golgi complex subunit 4 isoform X1. | Conserved oligomeric Golgi complex subunit 6 isoform X1. | 0.992 |
Cog4 | Cog8 | MGP_PahariEiJ_P0054273 | MGP_PahariEiJ_P0054173 | Conserved oligomeric Golgi complex subunit 4 isoform X1. | Conserved oligomeric Golgi complex subunit 8. | 0.991 |
Cog4 | Vill | MGP_PahariEiJ_P0054273 | MGP_PahariEiJ_P0026197 | Conserved oligomeric Golgi complex subunit 4 isoform X1. | Villin-like protein isoform X1. | 0.481 |
Cog6 | Cog3 | MGP_PahariEiJ_P0068572 | MGP_PahariEiJ_P0085508 | Conserved oligomeric Golgi complex subunit 6 isoform X1. | Conserved oligomeric Golgi complex subunit 3. | 0.997 |
Cog6 | Cog4 | MGP_PahariEiJ_P0068572 | MGP_PahariEiJ_P0054273 | Conserved oligomeric Golgi complex subunit 6 isoform X1. | Conserved oligomeric Golgi complex subunit 4 isoform X1. | 0.992 |
Cog6 | Cog8 | MGP_PahariEiJ_P0068572 | MGP_PahariEiJ_P0054173 | Conserved oligomeric Golgi complex subunit 6 isoform X1. | Conserved oligomeric Golgi complex subunit 8. | 0.996 |
Cog6 | Smim7 | MGP_PahariEiJ_P0068572 | MGP_PahariEiJ_P0047877 | Conserved oligomeric Golgi complex subunit 6 isoform X1. | Small integral membrane protein 7. | 0.910 |
Cog6 | Vill | MGP_PahariEiJ_P0068572 | MGP_PahariEiJ_P0026197 | Conserved oligomeric Golgi complex subunit 6 isoform X1. | Villin-like protein isoform X1. | 0.615 |
Cog8 | Cog3 | MGP_PahariEiJ_P0054173 | MGP_PahariEiJ_P0085508 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 3. | 0.997 |
Cog8 | Cog4 | MGP_PahariEiJ_P0054173 | MGP_PahariEiJ_P0054273 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 4 isoform X1. | 0.991 |
Cog8 | Cog6 | MGP_PahariEiJ_P0054173 | MGP_PahariEiJ_P0068572 | Conserved oligomeric Golgi complex subunit 8. | Conserved oligomeric Golgi complex subunit 6 isoform X1. | 0.996 |
Cog8 | Smim7 | MGP_PahariEiJ_P0054173 | MGP_PahariEiJ_P0047877 | Conserved oligomeric Golgi complex subunit 8. | Small integral membrane protein 7. | 0.915 |
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