Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Apc | Axin1 | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0055727 | Adenomatous polyposis coli protein isoform X1. | Axin-1 isoform X1. | 0.999 |
Apc | Btrc | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0021915 | Adenomatous polyposis coli protein isoform X1. | Beta-transducin repeat containing E3 ubiquitin protein ligase. | 0.950 |
Apc | Cdh1 | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0054154 | Adenomatous polyposis coli protein isoform X1. | Cadherin 1, type 1, E-cadherin. | 0.872 |
Apc | Ctnna1 | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0038918 | Adenomatous polyposis coli protein isoform X1. | Catenin alpha-1 isoform X1. | 0.865 |
Apc | Ctnna2 | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0050469 | Adenomatous polyposis coli protein isoform X1. | Catenin alpha-2 isoform X1. | 0.705 |
Apc | Ctnnb1 | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0026281 | Adenomatous polyposis coli protein isoform X1. | Catenin beta-1 isoform X1. | 0.999 |
Apc | Ctnnbip1 | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0080991 | Adenomatous polyposis coli protein isoform X1. | Beta-catenin-interacting protein 1 (inhibitor of beta-catenin and Tcf-4). | 0.891 |
Apc | Gsk3b | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0028940 | Adenomatous polyposis coli protein isoform X1. | Glycogen synthase kinase-3 beta isoform X1. | 0.999 |
Apc | Lef1 | MGP_PahariEiJ_P0038858 | MGP_PahariEiJ_P0071466 | Adenomatous polyposis coli protein isoform X1. | Lymphoid enhancer-binding factor 1 isoform X1. | 0.953 |
Axin1 | Apc | MGP_PahariEiJ_P0055727 | MGP_PahariEiJ_P0038858 | Axin-1 isoform X1. | Adenomatous polyposis coli protein isoform X1. | 0.999 |
Axin1 | Btrc | MGP_PahariEiJ_P0055727 | MGP_PahariEiJ_P0021915 | Axin-1 isoform X1. | Beta-transducin repeat containing E3 ubiquitin protein ligase. | 0.960 |
Axin1 | Cdh1 | MGP_PahariEiJ_P0055727 | MGP_PahariEiJ_P0054154 | Axin-1 isoform X1. | Cadherin 1, type 1, E-cadherin. | 0.567 |
Axin1 | Ctnnb1 | MGP_PahariEiJ_P0055727 | MGP_PahariEiJ_P0026281 | Axin-1 isoform X1. | Catenin beta-1 isoform X1. | 0.999 |
Axin1 | Ctnnbip1 | MGP_PahariEiJ_P0055727 | MGP_PahariEiJ_P0080991 | Axin-1 isoform X1. | Beta-catenin-interacting protein 1 (inhibitor of beta-catenin and Tcf-4). | 0.665 |
Axin1 | Gsk3b | MGP_PahariEiJ_P0055727 | MGP_PahariEiJ_P0028940 | Axin-1 isoform X1. | Glycogen synthase kinase-3 beta isoform X1. | 0.999 |
Axin1 | Lef1 | MGP_PahariEiJ_P0055727 | MGP_PahariEiJ_P0071466 | Axin-1 isoform X1. | Lymphoid enhancer-binding factor 1 isoform X1. | 0.969 |
Btrc | Apc | MGP_PahariEiJ_P0021915 | MGP_PahariEiJ_P0038858 | Beta-transducin repeat containing E3 ubiquitin protein ligase. | Adenomatous polyposis coli protein isoform X1. | 0.950 |
Btrc | Axin1 | MGP_PahariEiJ_P0021915 | MGP_PahariEiJ_P0055727 | Beta-transducin repeat containing E3 ubiquitin protein ligase. | Axin-1 isoform X1. | 0.960 |
Btrc | Cdh1 | MGP_PahariEiJ_P0021915 | MGP_PahariEiJ_P0054154 | Beta-transducin repeat containing E3 ubiquitin protein ligase. | Cadherin 1, type 1, E-cadherin. | 0.410 |
Btrc | Crebbp | MGP_PahariEiJ_P0021915 | MGP_PahariEiJ_P0027565 | Beta-transducin repeat containing E3 ubiquitin protein ligase. | CREB-binding protein isoform X1. | 0.590 |
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