STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nlrc3NLR family CARD domain-containing protein 3 isoform X1. (1102 aa)    
Predicted Functional Partners:
Traf6
TNF receptor-associated factor 6.
   
 0.690
Nlrc4
NLR family CARD domain-containing protein 4.
   
 0.653
Casp1
Caspase 1.
   
 0.637
Ikbkb
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1.
   
 0.612
Traf3
TNF receptor-associated factor 3 isoform X1.
    
 0.563
Mefv
Pyrin isoform X1.
   
 0.558
MGP_PahariEiJ_P0026945
annotation not available
    
 0.552
Pycard
Apoptosis-associated speck-like protein containing a CARD.
   
 0.547
Mavs
Mitochondrial antiviral signaling protein.
    
 0.537
Cxcr5
C-X-C chemokine receptor type 5.
   
 
 0.528
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.