STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdip1Cell death-inducing p53-target protein 1 isoform X1. (208 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia group M protein.
    
 0.805
Bcap31
B-cell receptor-associated protein 31.
      
 0.686
Cenpt
Centromere protein T.
    
 0.461
Lin52
Protein lin-52 homolog.
    
 0.461
Lin9
Protein lin-9 homolog isoform X1.
    
 0.447
Rpa1
Replication protein A 70 kDa DNA-binding subunit.
    
 0.440
Tesmin
Tesmin isoform X1.
   
 0.428
Lin54
Protein lin-54 homolog isoform X1.
   
 0.428
B2m
Beta-2-microglobulin.
   
 0.425
Rpa2
Replication protein A 32 kDa subunit.
   
 0.425
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.