STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnp2Nuclear transition protein 2. (107 aa)    
Predicted Functional Partners:
Tnp1
Spermatid nuclear transition protein 1 isoform X1.
   
  
 0.812
Prm2
Protamine-2.
   
  
 0.774
MGP_PahariEiJ_P0056682
Elongin-C.
    
 0.686
Prm3
Protamine-3.
   
  
 0.624
Cul5
Cullin-5 isoform X1.
   
 0.602
H1f7
Testis-specific H1 histone isoform X1.
   
  
 0.596
MGP_PahariEiJ_P0035857
annotation not available
    
 0.587
Elob
Elongin-B.
    
 0.587
Spem1
Spermatid maturation protein 1.
   
  
 0.553
Odf1
Outer dense fiber of sperm tails 1.
   
  
 0.550
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.