STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
St6gal1Beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 1). (403 aa)    
Predicted Functional Partners:
B4galt1
Beta-1,4-galactosyltransferase 1 isoform X1.
     
 0.972
B4galt3
Beta-1,4-galactosyltransferase 3.
     
 0.937
B4galt2
Beta-1,4-galactosyltransferase 2.
     
 0.928
St3gal3
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1.
     
0.917
St6gal2
Beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 2).
  
  
 
0.908
Mgat5
Alpha-1,3(6)-mannosylglycoprotein beta-1,6-N-acetyl-glucosaminyltransferase.
   
 
 0.593
Fut8
Glycoprotein 6-alpha-L-fucosyltransferase.
      
 0.582
Cmah
Cytidine monophosphate-N-acetylneuraminic acid hydroxylase isoform X1.
   
  
 0.508
Cd22
B-cell receptor CD22.
      
 0.503
Gcnt1
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase.
      
 0.503
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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