STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem44Transmembrane protein 44 isoform X1. (433 aa)    
Predicted Functional Partners:
Snrnp48
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
      
 0.572
Utp20
Small subunit processome component 20 homolog isoform X1.
      
 0.561
Rufy4
LOW QUALITY PROTEIN: RUN and FYVE domain-containing protein 4.
      
 0.558
Cbwd1
COBW domain-containing protein 1 isoform X1.
      
 0.504
Ppp1r18
Phostensin isoform X1.
      
 0.478
Pcif1
Phosphorylated CTD-interacting factor 1.
      
 0.463
Wdr46
U3 small nucleolar RNA-associated protein 7.
      
 0.437
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.